Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_076_00020.1 |
Family | CE8 |
Protein Properties | Length: 343 Molecular Weight: 37517.9 Isoelectric Point: 5.4763 |
Chromosome | Chromosome/Scaffold: 76 Start: 111856 End: 113719 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 51 | 331 | 0 |
KVRQDGSGDFKTVTDAVNSVAVGNKVRTILSIGPGVYKEKIKVDRSKPFITFYGQNMPKLTFDGTALKDGTFDSASVIVESDYFMAANIIFENTAPEPDG KMNLAQALAMRISGDKAAFYNCKFLGFQDTLCDDVGSHFFSNCYIEGTVDFIFGSGKSFYTDSELHSVAKDFAVITANSREKDEDDSAFVFVHCKVTGTG NIMLGRIWKDRARVVFAYTDMVGNVSPAGWENSNPKLSNEYVFYGEYMNMGPGANTDKRAPFAKKLTEAEAKPFIDKTFIK |
Full Sequence |
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Protein Sequence Length: 343 Download |
MIGKLTLIVV QATLLTTILF QIIPANIIYA QPSAGLDPDL AAAEKGQKII KVRQDGSGDF 60 KTVTDAVNSV AVGNKVRTIL SIGPGVYKEK IKVDRSKPFI TFYGQNMPKL TFDGTALKDG 120 TFDSASVIVE SDYFMAANII FENTAPEPDG KMNLAQALAM RISGDKAAFY NCKFLGFQDT 180 LCDDVGSHFF SNCYIEGTVD FIFGSGKSFY TDSELHSVAK DFAVITANSR EKDEDDSAFV 240 FVHCKVTGTG NIMLGRIWKD RARVVFAYTD MVGNVSPAGW ENSNPKLSNE YVFYGEYMNM 300 GPGANTDKRA PFAKKLTEAE AKPFIDKTFI KAETWLLPPP NL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 3.0e-87 | 46 | 338 | 305 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 9.0e-90 | 46 | 336 | 305 | + pectinesterase | ||
PLN02304 | PLN02304 | 4.0e-90 | 49 | 338 | 306 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 9.0e-102 | 50 | 338 | 299 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 4.0e-180 | 29 | 342 | 318 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78808.1 | 0 | 36 | 342 | 30 | 341 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27759.1 | 0 | 34 | 341 | 80 | 389 | unnamed protein product [Vitis vinifera] |
EMBL | CBI38547.1 | 0 | 36 | 342 | 55 | 365 | unnamed protein product [Vitis vinifera] |
EMBL | CBI38548.1 | 0 | 36 | 342 | 59 | 370 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277518.1 | 0 | 34 | 341 | 68 | 377 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4.2039e-45 | 50 | 336 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-37 | 52 | 336 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-18 | 49 | 338 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-18 | 49 | 338 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-18 | 49 | 338 | 8 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |