Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g01820.1 |
Family | CE8 |
Protein Properties | Length: 364 Molecular Weight: 40414.2 Isoelectric Point: 10.168 |
Chromosome | Chromosome/Scaffold: 14 Start: 1048072 End: 1051254 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 65 | 357 | 0 |
ITVNQNGGGHSKTVQGAVNMVPDNNRQRVKIFIFPGIYREKVRVPVTKPYVSFIGKRNRTASPIITWNSKSSDKGPNGTALGTYASATVGVDSDYFCATG ITFENSVIASAGGKGMQGVALRVSSPKAMFYRVRIKGTQDTLLDSTGNHYFLKCRIIGKVDFICGSAKSLYEKCRLQSIAENYGAIAAHHRDSPTDDTGF SFVSCSIRGSGSVYLGRAWGNYSRIIYSKCNMDGIINPQGWSDWNHSHRKKTAVFAEYQCKGRGADRRHRVPWSKSFSYPEASPFLYKSFIDG |
Full Sequence |
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Protein Sequence Length: 364 Download |
MMMMMMGLVS SRVVFLFVVS IFVIWAQVVD LAEGGAVRNY ISWEDLQVNE QRLAVKSSHN 60 QVRVITVNQN GGGHSKTVQG AVNMVPDNNR QRVKIFIFPG IYREKVRVPV TKPYVSFIGK 120 RNRTASPIIT WNSKSSDKGP NGTALGTYAS ATVGVDSDYF CATGITFENS VIASAGGKGM 180 QGVALRVSSP KAMFYRVRIK GTQDTLLDST GNHYFLKCRI IGKVDFICGS AKSLYEKCRL 240 QSIAENYGAI AAHHRDSPTD DTGFSFVSCS IRGSGSVYLG RAWGNYSRII YSKCNMDGII 300 NPQGWSDWNH SHRKKTAVFA EYQCKGRGAD RRHRVPWSKS FSYPEASPFL YKSFIDGDQW 360 LRL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 6.0e-98 | 62 | 361 | 303 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 7.0e-100 | 62 | 361 | 305 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-100 | 64 | 362 | 299 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-111 | 63 | 363 | 304 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 3.0e-176 | 38 | 363 | 328 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 40 | 363 | 33 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 3 | 363 | 1 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 33 | 363 | 25 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 52 | 363 | 7 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 9 | 363 | 31 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.99931e-42 | 65 | 362 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 6e-35 | 67 | 362 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000000003 | 61 | 283 | 30 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.0000000003 | 64 | 242 | 7 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000003 | 64 | 242 | 7 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |