Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G014000.1 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 35538.3 Isoelectric Point: 7.5851 |
Chromosome | Chromosome/Scaffold: 06 Start: 3047997 End: 3051195 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
ITVSQDGNGDYRTVQEAIDTVPLCNTCRTIIRLSPGVYKQPVYVPKTKNLITLAGLRPELTVLTWNNTATKIQHHQGSRLIGTGTFGCGTVIVEGEDFIA ENVTFENSSPEGSGQAVAIRVTADRCAFYNCKFLGWQDTLYLHHGRQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKTSQESTGYVFLR CVITGNGGSSYSYLGRPWGPFGRVVFAYTYMDQCIKHVGWHNWGKAENERSACFYEYRCFGPGCCQSKRVTWCRELLEEEAEEFLMHGFID |
Full Sequence |
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Protein Sequence Length: 317 Download |
MSARVITVSQ DGNGDYRTVQ EAIDTVPLCN TCRTIIRLSP GVYKQPVYVP KTKNLITLAG 60 LRPELTVLTW NNTATKIQHH QGSRLIGTGT FGCGTVIVEG EDFIAENVTF ENSSPEGSGQ 120 AVAIRVTADR CAFYNCKFLG WQDTLYLHHG RQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRKTSQESTG YVFLRCVITG NGGSSYSYLG RPWGPFGRVV FAYTYMDQCI 240 KHVGWHNWGK AENERSACFY EYRCFGPGCC QSKRVTWCRE LLEEEAEEFL MHGFIDPDPN 300 RPWLAQRMAL KIPYSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 3.0e-86 | 6 | 277 | 287 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 1.0e-88 | 4 | 275 | 280 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 7.0e-91 | 1 | 279 | 281 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-102 | 3 | 296 | 302 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 2 | 316 | 3 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 277 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9.94922e-44 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-28 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-28 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-28 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES797575 | 314 | 1 | 314 | 0 |
ES794113 | 279 | 1 | 279 | 0 |
DT552658 | 270 | 1 | 270 | 0 |
CO124146 | 260 | 1 | 260 | 0 |
ES794113 | 27 | 291 | 317 | 0.000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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