Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026347 |
Family | CE8 |
Protein Properties | Length: 349 Molecular Weight: 37656.6 Isoelectric Point: 8.3266 |
Chromosome | Chromosome/Scaffold: 898 Start: 726035 End: 727486 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 317 | 0 |
RVDQSGKGDFTTIQEAIDSVPSENSELVFIWVKPGVYVEKVTVPADKPFITLSGTSLYHANTTVISWCQSAENIFESATLSVLAPFFVARFLTVDNTYGS GGKAVALRVSGDRAAFYGCRILSYQDTLLDDTGSHYYSNCYIQGATDFICGHAASLFEKCHIHSVSESNNGFITAQHRDVESDESGYTFLGCKITATGPT FLGRPWGAYSRVVFAYSYMASDVLPAGWSDWGDSSKQSTAFYAEYKNYGPGADKSKRVAWSKKLSTMEASPFLSKKMI |
Full Sequence |
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Protein Sequence Length: 349 Download |
MKSYIDQLVA PVLTILIMIA SVAGTASPTS TKLSVANLIR VDQSGKGDFT TIQEAIDSVP 60 SENSELVFIW VKPGVYVEKV TVPADKPFIT LSGTSLYHAN TTVISWCQSA ENIFESATLS 120 VLAPFFVARF LTVDNTYGSG GKAVALRVSG DRAAFYGCRI LSYQDTLLDD TGSHYYSNCY 180 IQGATDFICG HAASLFEKCH IHSVSESNNG FITAQHRDVE SDESGYTFLG CKITATGPTF 240 LGRPWGAYSR VVFAYSYMAS DVLPAGWSDW GDSSKQSTAF YAEYKNYGPG ADKSKRVAWS 300 KKLSTMEASP FLSKKMIGGR NWIRAAPKLF RLGAKIVKAG SAGTPSQS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02773 | PLN02773 | 3.0e-90 | 38 | 317 | 297 | + pectinesterase | ||
PLN02671 | PLN02671 | 7.0e-98 | 34 | 324 | 305 | + pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-103 | 24 | 329 | 316 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-110 | 32 | 324 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-175 | 27 | 324 | 298 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 19 | 337 | 26 | 339 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 19 | 343 | 44 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 33 | 343 | 1 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 19 | 331 | 7 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 33 | 339 | 38 | 341 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 39 | 333 | 9 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 35 | 325 | 2 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-16 | 49 | 327 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-16 | 49 | 327 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-16 | 49 | 327 | 18 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |