Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a024891m |
Family | CE8 |
Protein Properties | Length: 232 Molecular Weight: 24860.5 Isoelectric Point: 4.9641 |
Chromosome | Chromosome/Scaffold: 477 Start: 45981 End: 49302 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 41 | 230 | 0 |
LGTYGSATFGVDAPYFVAKNITFKNTAPIPPPGADGMQGVALRISGDTSAFAGCKFLGAQDTLYDHRGRHYYEDCYIEGSVDFIFGDGRSYFKGCELHAI ATGAVAAQNRSTSSENTGFSIVNCRVTGSDIVYLGRAWAPFSTTLFAYTYMENNVNPEGWFDWGDPSRQSVTFGEYQCSGPGSNTAGRVK |
Full Sequence |
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Protein Sequence Length: 232 Download |
DKNQGSGNFT SIQGAIDSLP LVNQERVLID VHAGIYTSQP LGTYGSATFG VDAPYFVAKN 60 ITFKNTAPIP PPGADGMQGV ALRISGDTSA FAGCKFLGAQ DTLYDHRGRH YYEDCYIEGS 120 VDFIFGDGRS YFKGCELHAI ATGAVAAQNR STSSENTGFS IVNCRVTGSD IVYLGRAWAP 180 FSTTLFAYTY MENNVNPEGW FDWGDPSRQS VTFGEYQCSG PGSNTAGRVK C* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 1.0e-74 | 1 | 230 | 271 | + pectinesterase | ||
PLN02634 | PLN02634 | 1.0e-77 | 5 | 223 | 259 | + probable pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-84 | 1 | 229 | 270 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 7.0e-91 | 5 | 230 | 260 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-134 | 1 | 229 | 268 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27989.1 | 0 | 1 | 229 | 18 | 285 | unnamed protein product [Vitis vinifera] |
GenBank | EEC79546.1 | 0 | 1 | 229 | 103 | 370 | hypothetical protein OsI_20666 [Oryza sativa Indica Group] |
RefSeq | XP_002330522.1 | 0 | 2 | 229 | 87 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002440102.1 | 0 | 1 | 230 | 111 | 379 | hypothetical protein SORBIDRAFT_09g026060 [Sorghum bicolor] |
RefSeq | XP_002514210.1 | 0 | 1 | 229 | 88 | 355 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.99995e-41 | 5 | 229 | 15 | 279 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-34 | 43 | 230 | 79 | 276 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-18 | 42 | 223 | 84 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-18 | 42 | 223 | 84 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-18 | 42 | 223 | 84 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH701256 | 254 | 15 | 229 | 0 |
EY182830 | 195 | 38 | 229 | 0 |
EE105585 | 249 | 13 | 222 | 0 |
BQ610971 | 189 | 38 | 223 | 0 |
FS089294 | 190 | 43 | 229 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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