Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g038332m |
Family | CE8 |
Protein Properties | Length: 336 Molecular Weight: 36795.1 Isoelectric Point: 7.7667 |
Chromosome | Chromosome/Scaffold: 00004 Start: 3713535 End: 3715325 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 37 | 325 | 0 |
VTVDQSSSQYRTVQSAIDSIPAENNQWIKVHIKAGTYKEKVKIQRNKPCILLEGEGSGVTKITYDDHQSTDTSATFSSFADNVVAKGITFEVEGRDLGTL QAGNDITQALAARIYGDKSAFYDCRFLGVQDTLWDVQGRHFFKSCYIEGAIDFIFGNGQSVYEDCSVNSTAGLLIGGRGSGYITAQSRGSANDPGGFVFR GGEVTGTGQAYLGRAYGPYSRVIFYNAWLSSVVTPPGWNAWNLQGQEGNFMYAEVNCKGPGSDTSNRVSWEKKIDPKLLYKYSTSYFIN |
Full Sequence |
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Protein Sequence Length: 336 Download |
MRPVLKSLIV FTLLSTISFR AARADQDCKG SNVAYTVTVD QSSSQYRTVQ SAIDSIPAEN 60 NQWIKVHIKA GTYKEKVKIQ RNKPCILLEG EGSGVTKITY DDHQSTDTSA TFSSFADNVV 120 AKGITFEVEG RDLGTLQAGN DITQALAARI YGDKSAFYDC RFLGVQDTLW DVQGRHFFKS 180 CYIEGAIDFI FGNGQSVYED CSVNSTAGLL IGGRGSGYIT AQSRGSANDP GGFVFRGGEV 240 TGTGQAYLGR AYGPYSRVIF YNAWLSSVVT PPGWNAWNLQ GQEGNFMYAE VNCKGPGSDT 300 SNRVSWEKKI DPKLLYKYST SYFINQDGWI SKQPQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 6.0e-75 | 33 | 330 | 310 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-77 | 34 | 330 | 298 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 3.0e-80 | 36 | 330 | 297 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-92 | 14 | 334 | 322 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 7.0e-115 | 34 | 334 | 302 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002263748.1 | 0 | 33 | 334 | 27 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318946.1 | 0 | 1 | 334 | 1 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 8 | 334 | 6 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515259.1 | 0 | 14 | 334 | 338 | 660 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 28 | 334 | 29 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-38 | 30 | 307 | 6 | 282 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-33 | 33 | 330 | 2 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-17 | 35 | 253 | 4 | 240 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-17 | 35 | 253 | 4 | 240 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-17 | 35 | 253 | 4 | 240 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |