Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.008G278000.1 |
Family | CE8 |
Protein Properties | Length: 363 Molecular Weight: 40597 Isoelectric Point: 8.7126 |
Chromosome | Chromosome/Scaffold: 08 Start: 58561060 End: 58564126 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 64 | 356 | 0 |
IVVNKYGGGHSKTVQGAVDMVPENNKHRVKIYIYPGIYREKVRVAVNKPYVSFVGKRNQTASPVITWNSKSSDRGTNGQALGTFDTATVGVDSDYFCATG ITFENSVIATAGVKGMQGVALRVNSERAMFYQVRIKGAQDSLLDNTGNHYFLECDILGKVDFIFGSAKSLYKNCLLQSITDDFGAIAAHHRNSATEDTGF SFVGCNIRGSGRVYLGRAWGNYSRIIYSKCNMDDIIIPEGWSDWNQSDRKKTAVFGEYLCDGKGADRSNRAPWSKSFSYDEVAPFLHKSFIDG |
Full Sequence |
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Protein Sequence Length: 363 Download |
MMMMKLVSSR VLFLFVSVFV MWVRVNLAEG ENGHGGIRNY ISWEDLQVDE QRLTLKRHDD 60 VRVIVVNKYG GGHSKTVQGA VDMVPENNKH RVKIYIYPGI YREKVRVAVN KPYVSFVGKR 120 NQTASPVITW NSKSSDRGTN GQALGTFDTA TVGVDSDYFC ATGITFENSV IATAGVKGMQ 180 GVALRVNSER AMFYQVRIKG AQDSLLDNTG NHYFLECDIL GKVDFIFGSA KSLYKNCLLQ 240 SITDDFGAIA AHHRNSATED TGFSFVGCNI RGSGRVYLGR AWGNYSRIIY SKCNMDDIII 300 PEGWSDWNQS DRKKTAVFGE YLCDGKGADR SNRAPWSKSF SYDEVAPFLH KSFIDGDEWL 360 RL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 6.0e-96 | 63 | 361 | 299 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-100 | 61 | 360 | 303 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-102 | 59 | 360 | 305 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 9.0e-110 | 62 | 362 | 304 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 6.0e-171 | 31 | 362 | 335 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 33 | 362 | 29 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 1 | 362 | 1 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 40 | 362 | 34 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 62 | 362 | 18 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 5 | 362 | 22 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.00018e-42 | 64 | 361 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-35 | 65 | 361 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-16 | 63 | 313 | 33 | 312 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000004 | 75 | 241 | 19 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000004 | 75 | 241 | 19 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |