Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10001795m |
Family | CE8 |
Protein Properties | Length: 333 Molecular Weight: 36836.2 Isoelectric Point: 8.226 |
Chromosome | Chromosome/Scaffold: 22 Start: 1581248 End: 1582981 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 31 | 320 | 0 |
ITVDLNGGGNYKTVQSAIDSIPLQNQNWIRILIKKGIYIEKVTIPMDKGYIYMQGRGIEKTIIAYDDHQLTDTSPTFTAYPDNIIISGITFKNTYNIGLM TTLETPVKPAVAARMLGDKYVVIDSSFDGVQDTLYDCVGRHYYKRCVISGGIDFIFGYAQSLFEGCTVNLTVGIYAPDRAYGTITAQGRQSPKDNGGFLF KDCTVTGIGKALLGRAWQPYARVIFYRSKFCNAILPIGWDAWRAKGQEGHITFVEYGCTGAGADTSQRVPWLKKASTNILLSLTNGSFIN |
Full Sequence |
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Protein Sequence Length: 333 Download |
MVILLLVYKS AAEEYCYQQI NGISSQIANT ITVDLNGGGN YKTVQSAIDS IPLQNQNWIR 60 ILIKKGIYIE KVTIPMDKGY IYMQGRGIEK TIIAYDDHQL TDTSPTFTAY PDNIIISGIT 120 FKNTYNIGLM TTLETPVKPA VAARMLGDKY VVIDSSFDGV QDTLYDCVGR HYYKRCVISG 180 GIDFIFGYAQ SLFEGCTVNL TVGIYAPDRA YGTITAQGRQ SPKDNGGFLF KDCTVTGIGK 240 ALLGRAWQPY ARVIFYRSKF CNAILPIGWD AWRAKGQEGH ITFVEYGCTG AGADTSQRVP 300 WLKKASTNIL LSLTNGSFIN QEDWLSSLPI KY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 9.0e-73 | 23 | 325 | 303 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-75 | 30 | 325 | 317 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 7.0e-76 | 30 | 325 | 300 | + Probable pectinesterase | ||
PLN02497 | PLN02497 | 4.0e-120 | 15 | 330 | 318 | + probable pectinesterase | ||
PLN02176 | PLN02176 | 0 | 1 | 332 | 332 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY78730.1 | 0 | 1 | 331 | 1 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
GenBank | ACC68156.1 | 0 | 1 | 331 | 18 | 343 | putative pectinesterase family protein [Arabidopsis halleri subsp. halleri] |
RefSeq | NP_179505.1 | 0 | 1 | 332 | 18 | 339 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_850471.2 | 0 | 1 | 331 | 17 | 333 | pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 18 | 329 | 19 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6e-33 | 24 | 332 | 2 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-27 | 27 | 332 | 2 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000007 | 38 | 305 | 15 | 323 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000007 | 38 | 305 | 15 | 323 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000007 | 38 | 305 | 15 | 323 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AW036464 | 211 | 91 | 301 | 0 |
DV984237 | 300 | 40 | 325 | 0 |
EX315894 | 285 | 55 | 325 | 0 |
EX317112 | 282 | 58 | 325 | 0 |
GR458872 | 288 | 34 | 320 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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