Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10041815 |
Family | CE8 |
Protein Properties | Length: 381 Molecular Weight: 42175.5 Isoelectric Point: 9.0959 |
Chromosome | Chromosome/Scaffold: 272 Start: 1913753 End: 1915845 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 87 | 371 | 0 |
RSRVFPTLRKAIESIPVVNDCRVVISIGKGTYREKVEIPTTMAYITLKGAGTGKTIIEWDDTADRIGANGHPLGTFGSATFAVNSPYFIAENITFKNNAP PPPSGALGKQAVALRISGDNAAFIGCKFIGAQDTLYDHLGRHYFKHCYIEGSVDFVFGNGLSLYENCHLHAITNTFGALTAQKRESLLEETGFSFVKCKV TGSGALYLGRAWGSFSRVVFAYTFMDKIITPQGWYDWGDKNREMTVFYGQYKCWGPGANFGGRVPWSRELTDAEAEPFVSLGFID |
Full Sequence |
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Protein Sequence Length: 381 Download |
MLMMMRLKLL LLMLLLVDPI GSEELSSPED RNTLAIAEPS DGGYSTWLKS MASSLNKHAL 60 FQKPMNKVRP CLTLKVKKKK KHSRTSRSRV FPTLRKAIES IPVVNDCRVV ISIGKGTYRE 120 KVEIPTTMAY ITLKGAGTGK TIIEWDDTAD RIGANGHPLG TFGSATFAVN SPYFIAENIT 180 FKNNAPPPPS GALGKQAVAL RISGDNAAFI GCKFIGAQDT LYDHLGRHYF KHCYIEGSVD 240 FVFGNGLSLY ENCHLHAITN TFGALTAQKR ESLLEETGFS FVKCKVTGSG ALYLGRAWGS 300 FSRVVFAYTF MDKIITPQGW YDWGDKNREM TVFYGQYKCW GPGANFGGRV PWSRELTDAE 360 AEPFVSLGFI DGHEWLHDLL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 2.0e-108 | 91 | 376 | 294 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-110 | 91 | 376 | 286 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 5.0e-115 | 91 | 376 | 287 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-116 | 91 | 376 | 288 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 0 | 44 | 376 | 333 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17409.1 | 0 | 29 | 379 | 25 | 364 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266952.1 | 0 | 29 | 379 | 23 | 362 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310842.1 | 0 | 44 | 376 | 13 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 37 | 376 | 50 | 381 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
RefSeq | XP_002531506.1 | 0 | 26 | 376 | 23 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 91 | 376 | 19 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9.99967e-42 | 91 | 377 | 15 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-28 | 83 | 365 | 36 | 357 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 6e-23 | 85 | 365 | 12 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 6e-23 | 85 | 365 | 12 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |