| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 437695 |
| Family | GH28 |
| Protein Properties | Length: 475 Molecular Weight: 52342.1 Isoelectric Point: 7.5502 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 68 | 393 | 0 |
| KLGSKSVVWVPPGSYLTGTLFLRSNMTLHIDRGAKILGSSRQMDYPPEKDRWYVILAEGVENVGITGGGEVNGQSSKFVVRYDPKKNIMTSWNVTGNCLG DECRPRLVGFLRSTKIRVWNIDLRQPAYWCLHLVNSNFIHIHDISILGDFDTPNNDGIDIDGSNNTVIERCRIDTGDDAICPKTTYGPLVNLTVRDCWVR TKSCGVKLGSATFFDFHHLRFSNLIIVDSHRGLGIQLRDAGSVYGVIFANIVVSTRYYDPSWWGRAEPIYVTVCPRDESTRVGSVHSIEFRNITGRSENG IFLAASGNGAVIHSVKLVDVDLKIER | |||
| Full Sequence |
|---|
| Protein Sequence Length: 475 Download |
| MELYRHYVHV HLVVSLLFVS LISSSGVPNP SRPVQCNVRD YGALGNGSTL ETSSIQSAIN 60 ACHSRSNKLG SKSVVWVPPG SYLTGTLFLR SNMTLHIDRG AKILGSSRQM DYPPEKDRWY 120 VILAEGVENV GITGGGEVNG QSSKFVVRYD PKKNIMTSWN VTGNCLGDEC RPRLVGFLRS 180 TKIRVWNIDL RQPAYWCLHL VNSNFIHIHD ISILGDFDTP NNDGIDIDGS NNTVIERCRI 240 DTGDDAICPK TTYGPLVNLT VRDCWVRTKS CGVKLGSATF FDFHHLRFSN LIIVDSHRGL 300 GIQLRDAGSV YGVIFANIVV STRYYDPSWW GRAEPIYVTV CPRDESTRVG SVHSIEFRNI 360 TGRSENGIFL AASGNGAVIH SVKLVDVDLK IERWTSYSGD GGMQDFRPGC QGLISHDKRS 420 GMFVQRAHAL SLQNVSFTWV TSSGGGEEAP IEFGSRTPED SISLVNFAND FLAS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 0.0004 | 37 | 247 | 221 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN02218 | PLN02218 | 0.0004 | 33 | 384 | 385 | + polygalacturonase ADPG | ||
| PLN03003 | PLN03003 | 1.0e-5 | 37 | 247 | 215 | + Probable polygalacturonase At3g15720 | ||
| pfam12708 | Pectate_lyase_3 | 4.0e-8 | 37 | 95 | 60 | + Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. | ||
| COG5434 | PGU1 | 4.0e-42 | 37 | 438 | 446 | + Endopygalactorunase [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB41176.1 | 0 | 23 | 469 | 22 | 468 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_567055.1 | 0 | 23 | 468 | 22 | 467 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] |
| RefSeq | XP_001769606.1 | 0 | 38 | 457 | 1 | 411 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783745.1 | 0 | 36 | 471 | 33 | 458 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002322693.1 | 0 | 27 | 467 | 5 | 437 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3jur_D | 3e-16 | 30 | 319 | 24 | 347 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 3e-16 | 30 | 319 | 24 | 347 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 3e-16 | 30 | 319 | 24 | 347 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 3e-16 | 30 | 319 | 24 | 347 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 2uvf_B | 0.00000000000007 | 31 | 247 | 152 | 405 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
