| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039520 |
| Family | GH2 |
| Protein Properties | Length: 637 Molecular Weight: 72116.7 Isoelectric Point: 5.4171 |
| Chromosome | Chromosome/Scaffold: 15 Start: 194877 End: 199229 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 89 | 635 | 0 |
| PYVRSLSGFWKFFLAPCPSKVPPAFFDVAFQDAEWDMLPGFATQMAGPVPSNWQMHGFDKPIYTNIVYPFPLDPPHVPQDDNPTGCYRTCFQIPTEWQGR RIFLHFEAVDSAFFVWVNGVLVGYSQDSRLPAEFEISDHCHPSGSDEMNILAVQVLRWSDGSYLEDQDHWWLSGIHRDVLLLSKPQVFITDYFFKSSLTE DFSSSDIQVEVKIDNTRANPKDDIRASFTMDAALYGTGSWYAGDKSGLISTNVANLTVIPSSDAILGFIGYTLAGKLDMPKLWSAEQPNLYILVVTLKDA SGHVVDCESSLVGIRQVSKAPKQLLVNGKPVMIRGVNRHEHHPRIGKTNTESCMIKDLVLMKQYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETH GFHLSGHLKPPAMEISWATAILERVIGMVERDKNHASIISWSLGNESSYGPNHSAAAGWIREKDTSRLLHYEGGGSRTSSTDIICPMYMRVWDILKIAKD PTELRPLILCEYSHAMGNSNGSLDEYWEAIDSTFGLQGGFIWDWVDQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 637 Download |
| MIENLDVFAG MVFPCEDVSH RVWEDPSFIK WRKRDPHVPL HCHESVEGSL KYWHQRNRVD 60 VLLSKSAVWG DDAVQEALDS AAFWVKELPY VRSLSGFWKF FLAPCPSKVP PAFFDVAFQD 120 AEWDMLPGFA TQMAGPVPSN WQMHGFDKPI YTNIVYPFPL DPPHVPQDDN PTGCYRTCFQ 180 IPTEWQGRRI FLHFEAVDSA FFVWVNGVLV GYSQDSRLPA EFEISDHCHP SGSDEMNILA 240 VQVLRWSDGS YLEDQDHWWL SGIHRDVLLL SKPQVFITDY FFKSSLTEDF SSSDIQVEVK 300 IDNTRANPKD DIRASFTMDA ALYGTGSWYA GDKSGLISTN VANLTVIPSS DAILGFIGYT 360 LAGKLDMPKL WSAEQPNLYI LVVTLKDASG HVVDCESSLV GIRQVSKAPK QLLVNGKPVM 420 IRGVNRHEHH PRIGKTNTES CMIKDLVLMK QYNINAVRNS HYPQHPRWYE LCDLFGMYMI 480 DEANIETHGF HLSGHLKPPA MEISWATAIL ERVIGMVERD KNHASIISWS LGNESSYGPN 540 HSAAAGWIRE KDTSRLLHYE GGGSRTSSTD IICPMYMRVW DILKIAKDPT ELRPLILCEY 600 SHAMGNSNGS LDEYWEAIDS TFGLQGGFIW DWVDQV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 4.0e-56 | 89 | 273 | 187 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam02836 | Glyco_hydro_2_C | 4.0e-88 | 409 | 635 | 236 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 5.0e-132 | 91 | 635 | 547 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK10340 | ebgA | 7.0e-167 | 77 | 635 | 560 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 21 | 635 | 634 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 7 | 635 | 4 | 623 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 7 | 635 | 4 | 623 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 7 | 635 | 4 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 7 | 636 | 4 | 623 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 9 | 635 | 6 | 622 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jz2_D | 0 | 91 | 635 | 51 | 573 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1jz2_C | 0 | 91 | 635 | 51 | 573 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1jz2_B | 0 | 91 | 635 | 51 | 573 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1jz2_A | 0 | 91 | 635 | 51 | 573 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1jz1_P | 0 | 91 | 635 | 51 | 573 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 395 | 142 | 523 | 0 |
| EY819313 | 269 | 360 | 628 | 0 |
| CK261494 | 291 | 11 | 301 | 0 |
| DV476893 | 253 | 383 | 635 | 0 |
| HO804274 | 70 | 494 | 562 | 0.000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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