| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000026514 |
| Family | GH2 |
| Protein Properties | Length: 947 Molecular Weight: 107803 Isoelectric Point: 6.8782 |
| Chromosome | Chromosome/Scaffold: 008772119 Start: 271 End: 4930 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 38 | 755 | 0 |
| TSPWMEAVVPGTVLATLVKNKVVPDPFYGLKNESIIDIADSGREYYTFWFFTTFRCKLSGTQHLDLNFRAINYSAEVYLNGHKTVLPKGMFRRHSLDVTD VVHPGGENLLAVLVYPPDHPGSIPPEGGQGGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSISVTGPVKIIDPHLVSTFFDNYKRVYLHTTTELEN KSTQSAECSLNIQVTTELEGNFCLVEHVQTQHLSIPAGSRVHYTFPELFFYKPNLWWPNGMGKQSLYKVSITVDVKGYGESDLWGQLFGFRKIHSYIDTV TGGRLFKVNGQPIFIRGGNWILSDGLLRLSKKRYKTDIKFHADMNFNMIRCWGGGLAERPDFYHYCDIYGLLVWQEFWITGDVDGRGIPVSNPDGPLDHD LFLLSARDTVKLLRNHPSLALWVGGNEQVPPDDINTALKNDLRLHPHFEKSVNESGKSTEDLSPVLRDPSQYLDGTRVYIQGSMWDGFANXKGDFTDGPY EIQNPEDFFKDDYYKYGFNPEVGSVGMPVSATIRATMPPEGWQIPLFKKVSEYYEEVPNPIWEYHKYIPYSKPGKVHDQILLYGSQPKDLDDFCLKAQLV NYIQYRALLEGWTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLATYLIEVVNTTSEELSDIAIEASVWDLEGTCPYY KVHEMVSVPPKRTVPIAE | |||
| Full Sequence |
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| Protein Sequence Length: 947 Download |
| MAAIGKTKLD SGWLAARSTE VSLSGIQLTT THPPSIGTSP WMEAVVPGTV LATLVKNKVV 60 PDPFYGLKNE SIIDIADSGR EYYTFWFFTT FRCKLSGTQH LDLNFRAINY SAEVYLNGHK 120 TVLPKGMFRR HSLDVTDVVH PGGENLLAVL VYPPDHPGSI PPEGGQGGDH EIGKDVATQY 180 VEGWDWMCPI RDRNTGIWDE VSISVTGPVK IIDPHLVSTF FDNYKRVYLH TTTELENKST 240 QSAECSLNIQ VTTELEGNFC LVEHVQTQHL SIPAGSRVHY TFPELFFYKP NLWWPNGMGK 300 QSLYKVSITV DVKGYGESDL WGQLFGFRKI HSYIDTVTGG RLFKVNGQPI FIRGGNWILS 360 DGLLRLSKKR YKTDIKFHAD MNFNMIRCWG GGLAERPDFY HYCDIYGLLV WQEFWITGDV 420 DGRGIPVSNP DGPLDHDLFL LSARDTVKLL RNHPSLALWV GGNEQVPPDD INTALKNDLR 480 LHPHFEKSVN ESGKSTEDLS PVLRDPSQYL DGTRVYIQGS MWDGFANXKG DFTDGPYEIQ 540 NPEDFFKDDY YKYGFNPEVG SVGMPVSATI RATMPPEGWQ IPLFKKVSEY YEEVPNPIWE 600 YHKYIPYSKP GKVHDQILLY GSQPKDLDDF CLKAQLVNYI QYRALLEGWT SRMWTKYTGV 660 LIWKTQNPWT GLRGQFYDHL LDQTAGFYGC RCAAEPIHVQ LNLATYLIEV VNTTSEELSD 720 IAIEASVWDL EGTCPYYKVH EMVSVPPKRT VPIAEMXYPK SKNPKPVYFL LLKLYHKSDY 780 RIISRNFYWL HLSGGDYKLL EPYRKKTVPL KFTSAVFIKG TTYEMHIRVQ NTSKKPDAKT 840 LTYQNISLLN KNEVSWLQKI SRRFAMETDD LKVAEINGAN IGVAFFLHFS VHGVKKNHKE 900 GEDTRILPVH YSDNYFSLVP GEAMPIKISF EVPPGVTPRV TLAGWNY 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-7 | 84 | 161 | 80 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| pfam00703 | Glyco_hydro_2 | 5.0e-8 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10150 | PRK10150 | 3.0e-8 | 85 | 464 | 407 | + beta-D-glucuronidase; Provisional | ||
| PRK10340 | ebgA | 1.0e-17 | 113 | 464 | 370 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 4.0e-39 | 43 | 688 | 670 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82620.1 | 0 | 1 | 946 | 1 | 965 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 1 | 946 | 1 | 943 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 946 | 1 | 965 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 947 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 947 | 1 | 966 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 2 | 790 | 46 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 2 | 790 | 46 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzu_B | 0 | 2 | 790 | 46 | 767 | A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa D469a With Pnp-Beta-D-Glucosamine |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES793920 | 388 | 372 | 753 | 0 |
| ES832790 | 348 | 493 | 839 | 0 |
| GO871600 | 337 | 300 | 633 | 0 |
| DY284833 | 299 | 2 | 300 | 0 |
| DY284833 | 36 | 282 | 317 | 9.6 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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