CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.013G051400.7
FamilyGT41
Protein PropertiesLength: 602 Molecular Weight: 67737.8 Isoelectric Point: 7.5327
ChromosomeChromosome/Scaffold: 13 Start: 3777212 End: 3781868
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41843720
  RPNMAEAHANLASAYKDSGHVEAAIKSYRKALLLRTDFPEATCNLLHTLQCVCCWEDRDKMFNEVEGIIRRQISMAVLPSVQPFHAIAYPIDPVLALEIS
  RKYAAHCSIIASRFALPPFKHPAPLAVKHERGSGRLRIGYVSSDFGNHPLSHLMGSVFGMHNRENVEVFCYALSPNDGTEWRQRTQFEAEHFIDVSAMTS
  DMIAKLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPTRFSHIYSEKLVHLPHCYFVNDYKQ
GT413835840
  QHKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEMRLRAYAVAQGVQPDQIIFTDVAMKQEHIRRSALADLFLDTPLCN
  AHTTGTDILWAGLPMVTMPLEKMATRVAGSLCLATGLGDEMIVSSMKEYEERAVSLALNRPKLQSLTNRLKAARMTCPLFDTRRWVRNLDRAYFKMWSIH
  CS
Full Sequence
Protein Sequence     Length: 602     Download
MSAAAASCYK ATLAVTTGLS APFSNLAVIY KQQGNYSDAI SCYNEVLRIE PLAADGLVNR    60
GNTYKEIGRV SEAIQDYINA ITIRPNMAEA HANLASAYKD SGHVEAAIKS YRKALLLRTD    120
FPEATCNLLH TLQCVCCWED RDKMFNEVEG IIRRQISMAV LPSVQPFHAI AYPIDPVLAL    180
EISRKYAAHC SIIASRFALP PFKHPAPLAV KHERGSGRLR IGYVSSDFGN HPLSHLMGSV    240
FGMHNRENVE VFCYALSPND GTEWRQRTQF EAEHFIDVSA MTSDMIAKLI NEDKIQILIN    300
LNGYTKGARN EIFAMQPAPI QVSYMGFPGT TGATYIDYLV TDEFVSPTRF SHIYSEKLVH    360
LPHCYFVNDY KQKNLDVLDP TCQHKRSDYG LPEDKFIFAC FNQLYKMDPE IFNTWCNILK    420
RVPNSALWLL RFPAAGEMRL RAYAVAQGVQ PDQIIFTDVA MKQEHIRRSA LADLFLDTPL    480
CNAHTTGTDI LWAGLPMVTM PLEKMATRVA GSLCLATGLG DEMIVSSMKE YEERAVSLAL    540
NRPKLQSLTN RLKAARMTCP LFDTRRWVRN LDRAYFKMWS IHCSGQQPHH FKVAENDFDF    600
P* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00189TPR8.0e-135714892+
cd00189TPR3.0e-182511591+
pfam13844Glyco_transf_411.0e-73219372155+
pfam13844Glyco_transf_415.0e-78386579194+
COG3914Spy1.0e-10226581566+
Gene Ontology
GO TermDescription
GO:0005515protein binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002319130.101601323923predicted protein [Populus trichocarpa]
RefSeqXP_002319130.10.00000000015131123249predicted protein [Populus trichocarpa]
RefSeqXP_002319130.10.000000000000045147157299predicted protein [Populus trichocarpa]
RefSeqXP_002319130.10.00000000005912893212predicted protein [Populus trichocarpa]
RefSeqXP_002319130.10.00000000092612842144predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4gz6_D0537028390A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB4gz6_D0386591514718A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB4gz6_D0.0000000451133688A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB4gz6_C0537028390A Chain A, Raphanus Sativus Anionic Peroxidase.
PDB4gz6_C0386591514718A Chain A, Raphanus Sativus Anionic Peroxidase.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7952474591436010
HO7787254461566010
GO8815533282205470
HO79524752931447e-20
GO881553265415660.81
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_058_00216.4.161.321Aquca_058_00216.4.161.321Aquca_058_00216.3.387.547Aquca_058_00216.3.387.547Aquca_058_00216.2
Aquca_058_00216.1.601.761Aquca_058_00216.1.601.761Aquca_072_00077.2Aquca_072_00077.3Aquca_072_00077.1
Arabidopsis lyrata896453.457.745896453.457.745478494
Arabidopsis thalianaAT3G04240.1.457.745AT3G04240.1.457.745AT3G11540.1AT3G11540.2
Brachypodium distachyonBradi3g43577.3.610.769Bradi3g43577.3.610.769Bradi3g43577.2Bradi3g43577.1Bradi5g06647.1.621.781
Bradi5g06647.1.621.781Bradi2g58616.1.592.750Bradi2g58616.1.592.750Bradi3g42910.1
Brassica rapaBra040144.586.743Bra040144.586.743Bra001408Bra034832
Carica papayaevm.model.supercontig_51.46.234.522evm.model.supercontig_51.46.234.522
Capsella rubellaCarubv10012900m.457.745Carubv10012900m.457.745Carubv10013012mCarubv10012928m
Chlamydomonas reinhardtiig13482.t1
Citrus clementinaCiclev10018711m.453.741Ciclev10018711m.453.741Ciclev10011210mCiclev10011021m
Citrus sinensisorange1.1g003557m.291.579orange1.1g003557m.291.579orange1.1g002729m.402.690orange1.1g002729m.402.690orange1.1g002431m.402.690
orange1.1g002431m.402.690orange1.1g005626morange1.1g005594morange1.1g004753morange1.1g007075m
orange1.1g002273morange1.1g003891morange1.1g002443morange1.1g002441morange1.1g002438m
orange1.1g006937morange1.1g007634m
Cucumis sativusCucsa.027630.1.563.753Cucsa.027630.1.563.753Cucsa.083560.1
Eucalyptus grandisEucgr.L00641.1.550.718Eucgr.L00641.1.550.718Eucgr.K02568.1
Fragaria vescamrna16720.1-v1.0-hybrid.551.739mrna16720.1-v1.0-hybrid.551.739mrna15637.1-v1.0-hybrid
Glycine maxGlyma10g31190.2Glyma10g31190.1.468.756Glyma10g31190.1.468.756Glyma20g36330.1.468.756Glyma20g36330.1.468.756
Glyma20g36330.2Glyma19g38241.2Glyma19g38241.1Glyma03g35610.3Glyma03g35610.2
Glyma02g36210.4Glyma02g36210.3Glyma10g08710.1
Gossypium raimondiiGorai.011G150500.2.480.766Gorai.011G150500.2.480.766Gorai.011G150500.1.481.772Gorai.011G150500.1.481.772Gorai.011G150500.3
Gorai.013G189100.3.376.564Gorai.013G189100.3.376.564Gorai.013G189100.2.571.758Gorai.013G189100.2.571.758Gorai.013G189100.1.571.758
Gorai.013G189100.1.571.758Gorai.011G150500.5.520.693Gorai.011G150500.5.520.693Gorai.011G150500.4.520.693Gorai.011G150500.4.520.693
Gorai.007G367900.2Gorai.007G367900.1Gorai.002G238200.2Gorai.002G238200.1
Linum usitatissimumLus10003576.450.737Lus10003576.450.737Lus10004779.456.744Lus10004779.456.744Lus10003113.456.744
Lus10003113.456.744Lus10021336Lus10017009
Malus domesticaMDP0000233292.459.747MDP0000233292.459.747MDP0000119499MDP0000212192MDP0000846748
Manihot esculentacassava4.1_001015m.583.740cassava4.1_001015m.583.740cassava4.1_002695m.313.473cassava4.1_002695m.313.473cassava4.1_002691m.313.473
cassava4.1_002691m.313.473cassava4.1_001021m.581.740cassava4.1_001021m.581.740cassava4.1_001222mcassava4.1_001239m
cassava4.1_001390m
Medicago truncatulaMedtr1g079510.2.224.512Medtr1g079510.2.224.512Medtr1g079510.1.466.754Medtr1g079510.1.466.754
Mimulus guttatusmgv1a000777m.468.756mgv1a000777m.468.756mgv1a000982m.534.691mgv1a000982m.534.691mgv1a000971m
Oryza sativaLOC_Os01g68680.1.495.747LOC_Os01g68680.1.495.747LOC_Os02g28830.1.255.415LOC_Os02g28830.1.255.415LOC_Os08g44510.1
Panicum virgatumPavirv00063187m.616.777Pavirv00063187m.616.777Pavirv00007611mPavirv00052192m
Physcomitrella patensPp1s263_4V6.1.478.766Pp1s263_4V6.1.478.766Pp1s177_132V6.1.476.764Pp1s177_132V6.1.476.764Pp1s346_18V6.1
Pp1s456_4V6.1Pp1s150_16V6.1
Phaseolus vulgarisPhvul.007G119800.1.469.757Phvul.007G119800.1.469.757Phvul.001G192300.2Phvul.001G192300.1Phvul.007G153100.2
Phvul.007G153100.1
Picea abiesMA_76964g0020.246.533MA_76964g0020.246.533MA_247226g0010.309.469MA_247226g0010.309.469MA_869746g0010
MA_475186g0010MA_261690g0010
Populus trichocarpaPotri.013G051400.7.84.372Potri.013G051400.7.84.372Potri.013G051400.6.224.512Potri.013G051400.6.224.512Potri.013G051400.5
Potri.013G051400.4.463.751Potri.013G051400.4.463.751Potri.013G051400.3.463.751Potri.013G051400.3.463.751Potri.013G051400.2.463.751
Potri.013G051400.2.463.751Potri.013G051400.1.463.751Potri.013G051400.1.463.751Potri.019G025600.5.224.512Potri.019G025600.5.224.512
Potri.019G025600.2.459.747Potri.019G025600.2.459.747Potri.019G025600.1.459.747Potri.019G025600.1.459.747Potri.019G025600.6.213.376
Potri.019G025600.6.213.376Potri.019G025600.4.417.580Potri.019G025600.4.417.580Potri.019G025600.3.478.641Potri.019G025600.3.478.641
Potri.006G208900.1Potri.016G075700.4Potri.016G075700.3Potri.016G075700.1Potri.016G075700.2
Potri.006G208900.3Potri.006G208900.2
Prunus persicappa000862m.459.747ppa000862m.459.747ppa001075m
Ricinus communis29680.m001749.589.74729680.m001749.589.74727556.m00005030032.m00047548742.m000013
Setaria italicaSi016363mSi016197m.619.779Si016197m.619.779Si000265m.480.641Si000265m.480.641
Si013329mSi013225m
Selaginella moellendorffii143846.391.643143846.391.643159012
Sorghum bicolorSb04g019560.1.619.779Sb04g019560.1.619.779Sb07g024110.1
Thellungiella halophilaThhalv10020104mThhalv10020000m.431.719Thhalv10020000m.431.719Thhalv10019996m.457.745Thhalv10019996m.457.745
Thhalv10020052mThhalv10020017m
Vitis viniferaGSVIVT01026359001.593.754GSVIVT01026359001.593.754GSVIVT01033891001
Volvox carteriVocar20006483m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)