| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10006461 |
| Family | GH5 |
| Protein Properties | Length: 577 Molecular Weight: 64250.6 Isoelectric Point: 6.5759 |
| Chromosome | Chromosome/Scaffold: 743 Start: 206079 End: 208867 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 41 | 350 | 4.60046e-42 |
| DAAGRRVKLACVNLVSHLEPLVAEGLSKLPIEAIAGKITSLGFNCVRLTWPIYLVTNDSLGSLTVRESFRRLGLFDSLAGIQANNPAIVDLSLVMAFQNV VSSLGENNVMVILDNHITTPGWCCSNNDGNGFFNDELFDPELWITGLTKMATMFRASTSVVGMSLRNELRGPRQNTNDWYKYMQRGAEAVHSANPNVLVL LSGLSFDTDLSFLSRKMVSLSFRKKLVFEMHWYGFSDGQAWANGNVNDVCGRVGREKVRNGLFLVEKGYPLFVSEFGLDLRGTNVNDNRYVDCFMAYAAE HDLDWAYWTI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MANHKHHINL LSTIFLLFLL LPQKSTPYPL STSSRWIVDD DAAGRRVKLA CVNLVSHLEP 60 LVAEGLSKLP IEAIAGKITS LGFNCVRLTW PIYLVTNDSL GSLTVRESFR RLGLFDSLAG 120 IQANNPAIVD LSLVMAFQNV VSSLGENNVM VILDNHITTP GWCCSNNDGN GFFNDELFDP 180 ELWITGLTKM ATMFRASTSV VGMSLRNELR GPRQNTNDWY KYMQRGAEAV HSANPNVLVL 240 LSGLSFDTDL SFLSRKMVSL SFRKKLVFEM HWYGFSDGQA WANGNVNDVC GRVGREKVRN 300 GLFLVEKGYP LFVSEFGLDL RGTNVNDNRY VDCFMAYAAE HDLDWAYWTI VGSYYLRQGV 360 VGLSEVYGLL DVDWMELRNQ SFIEKIKGIQ APFQGPGLGE RRQHEVIFHP STGKCILRGK 420 TYLDSPTLGP CTESDEWTFS SKGTLSQVGT YFCLKANELG QPVQLDIDCS NWTMISDSRM 480 HLSTKLKDGI SSVCLDVDPD NNIIANPCKC LSKDKGCDPV SQWFKLVTST RAPSGEDDGL 540 VTRAREMLFK VLDLVLYYIG RMFGTLALKI ARGIEG* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 0.002 | 46 | 383 | 373 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| smart00458 | RICIN | 0.002 | 407 | 508 | 118 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| cd00161 | RICIN | 0.0001 | 405 | 508 | 121 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 6.0e-20 | 68 | 350 | 289 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 28 | 531 | 3 | 507 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 16 | 530 | 15 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312657.1 | 0 | 20 | 534 | 1 | 516 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 29 | 534 | 4 | 509 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 22 | 555 | 25 | 566 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000001 | 32 | 349 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000001 | 32 | 349 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00000000009 | 32 | 349 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000009 | 32 | 349 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 3axx_C | 0.0007 | 47 | 382 | 61 | 402 | A Chain A, Functional Analysis Of Hyperthermophilic Endocellulase From The Archaeon Pyrococcus Horikoshii |
