y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.178750.1 |
Family | GH9 |
Protein Properties | Length: 628 Molecular Weight: 69624.7 Isoelectric Point: 9.2426 |
Chromosome | Chromosome/Scaffold: 01227 Start: 1103903 End: 1108501 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 118 | 591 | 0 |
YSEALRKALLFFNAQKSGRLGKSNNITWRGNSGLNDGNETLAKGGLVGGYYDSGENSKYNFPMAYSMTMLSWSLIEYSHKFKSINEYDHLRDLIKWGTDY LLLTFNSSSTKITQIYSQVGGSQNGSQIPDDSTCWQKPEQMDYNRPTQTTFQGPDLAGEMSAALSAASIVFRDDPLYSAKLIKGAETLFTFARDSGRRSR YSRDNAFIAAAYNSSGYYDEYMWGAAWLYYATGNASYLYLATLPGIPKNARAFNVTAVSSVPSWNNKLPAAMVLLTRVRMMLNPGYPYEEMLSMYQTVTG LNMCSYLKQFRVYNWTQGGMMIMNKGQQQGQNLQYIANAAFLANLFADYLNSTGVPGFNCGPNYIPSTFIRNFATSQIDYILGNNPLNMSYVVGYGTKFP RRVHHRGASIPSDNKYYSCEGGFKWRDNPGPNPHNITGAMVGGPDQFDKFRDVRTNPNYTEPTLAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 628 Download |
MQGGNHWGGP LEVIDNNGGG GEDHDRRTAA EDWDRAALQS QTFNQNELDE TQRSWLLGPP 60 DGKKKKKYVD LGCVMVSRKA LKWSLISILI AFCVIGLPII VAKTWPRHHP PPLPPDRYSE 120 ALRKALLFFN AQKSGRLGKS NNITWRGNSG LNDGNETLAK GGLVGGYYDS GENSKYNFPM 180 AYSMTMLSWS LIEYSHKFKS INEYDHLRDL IKWGTDYLLL TFNSSSTKIT QIYSQVGGSQ 240 NGSQIPDDST CWQKPEQMDY NRPTQTTFQG PDLAGEMSAA LSAASIVFRD DPLYSAKLIK 300 GAETLFTFAR DSGRRSRYSR DNAFIAAAYN SSGYYDEYMW GAAWLYYATG NASYLYLATL 360 PGIPKNARAF NVTAVSSVPS WNNKLPAAMV LLTRVRMMLN PGYPYEEMLS MYQTVTGLNM 420 CSYLKQFRVY NWTQGGMMIM NKGQQQGQNL QYIANAAFLA NLFADYLNST GVPGFNCGPN 480 YIPSTFIRNF ATSQIDYILG NNPLNMSYVV GYGTKFPRRV HHRGASIPSD NKYYSCEGGF 540 KWRDNPGPNP HNITGAMVGG PDQFDKFRDV RTNPNYTEPT LAGNAGLVAA LVSLTTTAGF 600 GIDKNTIFSG IPPLGPKTPP PPPPWKP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 4.0e-102 | 118 | 580 | 477 | + endoglucanase | ||
PLN02266 | PLN02266 | 3.0e-102 | 118 | 579 | 475 | + endoglucanase | ||
PLN02613 | PLN02613 | 2.0e-104 | 116 | 580 | 480 | + endoglucanase | ||
PLN02345 | PLN02345 | 3.0e-121 | 121 | 580 | 469 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 4.0e-139 | 118 | 580 | 468 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 611 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | XP_002266444.1 | 0 | 1 | 611 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312211.1 | 0 | 1 | 627 | 1 | 620 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315101.1 | 0 | 1 | 611 | 1 | 605 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 611 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 118 | 595 | 5 | 429 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
PDB | 1ksc_A | 0 | 118 | 595 | 5 | 429 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
PDB | 1ks8_A | 0 | 118 | 595 | 5 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 106 | 599 | 10 | 464 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 114 | 599 | 2 | 445 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |