Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G151700.3 |
Family | GH9 |
Protein Properties | Length: 581 Molecular Weight: 64518.1 Isoelectric Point: 9.394 |
Chromosome | Chromosome/Scaffold: 03 Start: 16555436 End: 16560068 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 87 | 544 | 0 |
SGKLPKHNNVSWRGSSCLGDGKGKQGSFYKDLVGGYYDAGDAIKFHFPASFSMTMLSWSVIEYSAKYEAAGELNHVKEIIKWGADYFLKTFNSSADTIDR IVAQVGSGDTSGGSTTQNDHYCWMRPEDIDYVRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGRYSASGSEAAIFYNS TSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTKFN RTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGWYCGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHYPKHLHHRGASIPKNKIR YNCKGGWKWRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 581 Download |
MRLSRAGCWV QLSKRRRRNM WIWAVSLLVA RSLCGLLGVS LLLVYWLVLL LLLLKLCLAI 60 ITLMLQLITT LLLYIRHSCS SMLKDVSGKL PKHNNVSWRG SSCLGDGKGK QGSFYKDLVG 120 GYYDAGDAIK FHFPASFSMT MLSWSVIEYS AKYEAAGELN HVKEIIKWGA DYFLKTFNSS 180 ADTIDRIVAQ VGSGDTSGGS TTQNDHYCWM RPEDIDYVRP VTECSSCSDL AAEMAAALAS 240 ASIVFKDNKA YSQKLVHGAK TLFKFARDQR GRYSASGSEA AIFYNSTSYW DEFIWGGAWL 300 YYATGNNSYL QLATMPGLAK HAGAFWGGPD YGVLSWDNKL AGAQLLLSRL RLFLSPGYPY 360 EEILSTFHNQ TSIIMCSYLP IFTKFNRTKG GLIELNHGRP QPLQYVVNAA FLATLFSDYL 420 EAADTPGWYC GPNFYSTDVL RDFAKTQIDY ILGKNPRKMS YIVGFGNHYP KHLHHRGASI 480 PKNKIRYNCK GGWKWRDTSK PNPNTLVGAM VAGPDRHDGF HDVRTNYNYT EPTIAGNAGL 540 VAALVALSGD KTTGIDKNTI FSAVPPMFPT PPPPPAPWKP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 2.0e-94 | 87 | 532 | 458 | + endoglucanase | ||
PLN02171 | PLN02171 | 1.0e-96 | 87 | 533 | 457 | + endoglucanase | ||
PLN02613 | PLN02613 | 3.0e-97 | 87 | 533 | 459 | + endoglucanase | ||
PLN02345 | PLN02345 | 3.0e-125 | 87 | 533 | 457 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-143 | 87 | 534 | 454 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS45400.1 | 0 | 87 | 580 | 126 | 619 | endo-1,4-beta-glucanase [Populus tremuloides] |
GenBank | AAT75041.1 | 0 | 87 | 580 | 126 | 619 | Cel9A [Populus tremula x Populus tremuloides] |
GenBank | ADB82903.1 | 0 | 87 | 564 | 126 | 603 | membrane-bound endo-beta-1,4-glucanase [Populus alba x Populus grandidentata] |
RefSeq | XP_002299405.1 | 0 | 87 | 564 | 126 | 603 | endo-1,4-beta-glucanase [Populus trichocarpa] |
RefSeq | XP_002332697.1 | 0 | 87 | 580 | 126 | 619 | hypothetical protein POPTRDRAFT_675657 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 87 | 547 | 21 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 87 | 547 | 21 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 87 | 547 | 21 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 87 | 547 | 22 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 87 | 547 | 22 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |