| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10021427 |
| Family | GH29 |
| Protein Properties | Length: 499 Molecular Weight: 56034.3 Isoelectric Point: 5.6995 |
| Chromosome | Chromosome/Scaffold: 612 Start: 278886 End: 281103 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 36 | 334 | 0 |
| QLQWQLTTEMSMFLHFGPNTFTNSEWGTGHADPTVFAPTQLNATQWVEVAKETGFNRVILTAKHHDGFCLWPSEYTNYSVKSSSLWKDGNGDVVKELALG AEKGGLGFGVYLSPWDRHEDCYGKTVEYNEFYVGQMTELLTSYGEIKEVWLDGAKGEGAKDMDYYFERWFNLIHQHQPKAVIFSDAGPDTRWIGDEGGVA GSTCWSLFNRSDATIGGTDTLYSQNGDRYGHDWVPAECDVSIRPGWFWHPSESPKSALQLLDIYYKSAGRNCLLLLNVPPNSSGLISPEDIQVLREFAN | |||
| Full Sequence |
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| Protein Sequence Length: 499 Download |
| MKPISIFVFL IIFPISNSIL QTPPPLPILP IPTFPQLQWQ LTTEMSMFLH FGPNTFTNSE 60 WGTGHADPTV FAPTQLNATQ WVEVAKETGF NRVILTAKHH DGFCLWPSEY TNYSVKSSSL 120 WKDGNGDVVK ELALGAEKGG LGFGVYLSPW DRHEDCYGKT VEYNEFYVGQ MTELLTSYGE 180 IKEVWLDGAK GEGAKDMDYY FERWFNLIHQ HQPKAVIFSD AGPDTRWIGD EGGVAGSTCW 240 SLFNRSDATI GGTDTLYSQN GDRYGHDWVP AECDVSIRPG WFWHPSESPK SALQLLDIYY 300 KSAGRNCLLL LNVPPNSSGL ISPEDIQVLR EFANLRRSIF SHNLAQNATF LASSTRGGSQ 360 NLRFAPNNVL KEGIYTYWAP EENRSFSTLY IDLRGMVSFN VIRVQEPIHM GQRIVAFHVE 420 ALNPDGEWIQ VVEGTTVGYQ RLLLFPSVVA RQLRLVVDQS RADPLISYIG VYIDRYLSPD 480 RVIQLSPGTS HSHHVAVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00754 | F5_F8_type_C | 0.0004 | 352 | 462 | 117 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
| pfam01120 | Alpha_L_fucos | 3.0e-25 | 47 | 333 | 326 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 2.0e-26 | 47 | 334 | 333 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 1.0e-60 | 40 | 472 | 449 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180377.2 | 0 | 23 | 481 | 29 | 486 | ATFUC1 (alpha-L-fucosidase 1); alpha-L-fucosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q8GW72 | 0 | 23 | 481 | 29 | 486 | FUCO1_ARATH RecName: Full=Alpha-L-fucosidase 1; AltName: Full=Alpha-L-fucoside fucohydrolase; AltName: Full=Alpha-1,3/4-fucosidase; Short=AtFUC1; Flags: Precursor |
| RefSeq | XP_002276131.1 | 0 | 36 | 476 | 54 | 488 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313533.1 | 0 | 33 | 476 | 15 | 456 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523703.1 | 0 | 35 | 476 | 66 | 506 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3mo4_B | 0 | 32 | 467 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 0 | 32 | 467 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3ues_B | 0 | 32 | 467 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 32 | 467 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3uet_B | 0 | 32 | 467 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
