Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G072400.1 |
Family | GT31 |
Protein Properties | Length: 717 Molecular Weight: 81713.6 Isoelectric Point: 6.8185 |
Chromosome | Chromosome/Scaffold: 12 Start: 9799508 End: 9803150 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 438 | 619 | 0 |
ERMAVRKSWMQHRRIKSSNVVARFFVALHTRKEVNLELKKEAEYFGDIVVVPYMDNYDLVVLKTVAICEYGVRTVRAKYIMKGDDDTFVRVDFIIDEVNK VPAGRSLYIGNINYYHKPLRYGKWEVTYEEWPEEDYPPYANGPGYILSSDIACFIVSEFESHKLKLFKMEDVSMGMWVEQFN |
Full Sequence |
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Protein Sequence Length: 717 Download |
MKRGKSDTKL DKLDRFVSLS RQKSVQILLA LAVIYMLLVT LEIPFVFDSG PTSETTTTTP 60 TPTLAGFSEL QSEQVLQDKD APTRPLNWVS HNFSRPSQSQ LDASKILSSL GFHPETLDPT 120 KKDGSVDLHK AAKTAWEEGI KLWDEVQSGK VKLLEVSNLK NISEPCPISV TLSGSDFLKR 180 SKLLELPCGL TLGSHITLVG KPRAAHAEKD PKIALVKEAD DEVMVSQFIM ELLGLKTVEA 240 EDPPKILHFN PRLKGDWSLK PVIEQNTCYR MQWGTALRCE GWGSEVDEET VDDQVQCEKW 300 IRDDDDISEE SKANLWLNRL IDQTKKVTFD WPFPFAEEKL FVLTLSAGLE GYHVNVDGRH 360 VTSFPYRTGF TLEDATGLAV TGDIDVHSVF AASLPSNHPG FSLHRHLQMS SRWKAPSLSV 420 GSVELFIGVL SAANHFAERM AVRKSWMQHR RIKSSNVVAR FFVALHTRKE VNLELKKEAE 480 YFGDIVVVPY MDNYDLVVLK TVAICEYGVR TVRAKYIMKG DDDTFVRVDF IIDEVNKVPA 540 GRSLYIGNIN YYHKPLRYGK WEVTYEEWPE EDYPPYANGP GYILSSDIAC FIVSEFESHK 600 LKLFKMEDVS MGMWVEQFNR SRPVEYVHSL KFCQFGCIEG YYTAHYQTPR QMICLWEKLQ 660 KQGRAQCCNE IMIRTSVNER PKCRNRERMI TRFGEMRTGS WMRVTTWGDC PEKLKI* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 7.0e-16 | 187 | 389 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 1.0e-18 | 184 | 390 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam01762 | Galactosyl_T | 1.0e-18 | 437 | 616 | 191 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
pfam00337 | Gal-bind_lectin | 1.0e-22 | 183 | 389 | 207 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
PLN03133 | PLN03133 | 7.0e-120 | 89 | 670 | 592 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95149.1 | 0 | 36 | 669 | 1 | 640 | unknown [Populus trichocarpa] |
RefSeq | XP_002268603.1 | 0 | 70 | 669 | 66 | 668 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318619.1 | 0 | 1 | 716 | 1 | 711 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322135.1 | 0 | 1 | 669 | 1 | 672 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511491.1 | 0 | 1 | 669 | 1 | 668 | galactosyltransferase, putative [Ricinus communis] |