Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra015995 |
Family | GT4 |
Protein Properties | Length: 944 Molecular Weight: 107045 Isoelectric Point: 6.83 |
Chromosome | Chromosome/Scaffold: 07 Start: 19899831 End: 19903529 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 574 | 737 | 1.54143e-44 |
EREKPIIFSMARLDIVKNITGLVEWYGKDKRLREMANLVVVAGFFDMSKSNDREEKAEIKKMHDLIEKYKLKGSFRWIAAQTDRYRNSELYRCIADTKGV FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVAKIGDFFSKC |
Full Sequence |
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Protein Sequence Length: 944 Download |
MASASSPAML QRSDSIADKM PDALKQSRYH MKRCFASFVK GGKRLMKREN LMNEIEKCIE 60 DSLERKKIME GLFGYILSCT QEAAVVPPFV ALAARPNPGF WEYVKVNAGD LTVDEITATD 120 YLKLKESVFD ESWANDENAL EIDFGAIDFT TPRLTLPTSI GNGADYISKF ISSKLGGKSD 180 KLEPLLNYLL SLNHHGENLM INEDLNTVTK LQKSLMLAVN VVSTYPKHTP YETFSQRLKE 240 MGFEKGWGNT SERVKETMVM LSQVLEAPDS VKLDLLFSRL PTVFNVVIFS VHGYFGQQDV 300 LGLPDTGGQV VYILDQVRAL EEELLIRINQ QGLGFKPQIL VVTRLIPEAR GTKCDQELEA 360 IEGTKHSHIL RVPFVTEKGV LRQWVSRFDI YPYLERFTQD ATSKILQRFD CKPDLIIGNY 420 TDGNLVASLM ATKLGVTQGT IAHALEKTKY EDSDAKWKEL DPKYHFSCQF TADLIAMNVT 480 DFIITSTYQE IAGSKERPGQ YESHTAFTMP GLCRVVSGID VFDPKFNIAA PGADQSVYFP 540 YTETQKRLTK FHPSIQELLY NEKDNQEHMG YLAEREKPII FSMARLDIVK NITGLVEWYG 600 KDKRLREMAN LVVVAGFFDM SKSNDREEKA EIKKMHDLIE KYKLKGSFRW IAAQTDRYRN 660 SELYRCIADT KGVFVQPALY EAFGLTVIEA MNCGLPTFAT NQGGPAEIIV DGVSGFHIDP 720 NNGDESVAKI GDFFSKCGTD GLYWDTISKG GLKRIYECYT WKIYAEKLLK MGSMYGFWRQ 780 VNEDQKKAKQ RYIEMFYNLQ FKQLTKKVTI PEDKSLPLRL ASLRNLLPKK PTSLGGGSKQ 840 KEVNETEKMK QESKDGQEHN ESTVGGEVRE GLLAAEASEK MKKVIETSEE TQRLEKMKIA 900 YGQQQQHQGV STVRNLFWSV VVCLYIFYVL KQRFFGTYSV QED* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 2.0e-65 | 286 | 771 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 4.0e-121 | 285 | 769 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 4 | 814 | 811 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 28 | 808 | 782 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 12 | 561 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35298.1 | 0 | 1 | 853 | 1 | 853 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_177480.1 | 0 | 3 | 942 | 2 | 941 | SUS6 (SUCROSE SYNTHASE 6); UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] |
RefSeq | XP_002270861.1 | 0 | 1 | 861 | 1 | 861 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329693.1 | 0 | 4 | 804 | 2 | 801 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526290.1 | 0 | 4 | 842 | 2 | 827 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 3s29_G | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 3s29_F | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 3s29_E | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 3s29_D | 0 | 4 | 813 | 2 | 807 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 802 | 10 | 810 | 0 |
BU103683 | 810 | 1 | 810 | 0 |
FG227316 | 455 | 283 | 736 | 0 |
CX109054 | 600 | 107 | 706 | 0 |
GW837855 | 432 | 331 | 761 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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