Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma01g34760.1 |
Family | AA5 |
Protein Properties | Length: 601 Molecular Weight: 67577.2 Isoelectric Point: 8.7245 |
Chromosome | Chromosome/Scaffold: 01 Start: 47218317 End: 47222203 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA5 | 68 | 600 | 0 |
ETNNLGHWELINKQSGVSAMQINLMPNNKMLVYDATVYRTSRLPYPKGMPCVQWVDDNLKQSKEDCFAHSMEYDIETNQVRALTVKTDPWCSCGGLTPDG TLVVAGGFADGGKTSRYYGGQPDCQDCDWREYPNKLQEPRWYATQAILANGEYIVIGGRRSFSYEFFPKEGQPSDKPIFFPFLYETSDIDENNLYPFVHL SSDGNLFIFANNRSLLLNPTTNKVVRTYPVLPGGSRNYPASGMSSILPIKLDGTELSSASIKVEVLVCGGNSHDSFILAETEKIFKPAIKDCSRMVITDP DPKWDSEEMPSGRTMGDSLVLPNGQILFINGAQKGTAAWWDADEPNFTPVLYFSEKPKGQRFKVLKPSQIARMYHSTSAVLPSGKIWVGGSNTHDTYKDK DRFPTETRIEAFSPPYLDPKLDKYRPQIVEESSEKKLMYGKNFETQFKLQDTNQKLTKQDIKVSMYFPPFTTHGYSMNQRLLFLKTFIAQNSEGTYKVTS KAPTFREVAPPGYYLLFIVHRGVPSKGMWVQIG |
Full Sequence |
---|
Protein Sequence Length: 601 Download |
MAPLNKVLLL LTLLFLAVDA KYKNKKDKKN SVFHKIPKFP KFPVPIIGGD QKVVVDGGNN 60 AIAKPDFETN NLGHWELINK QSGVSAMQIN LMPNNKMLVY DATVYRTSRL PYPKGMPCVQ 120 WVDDNLKQSK EDCFAHSMEY DIETNQVRAL TVKTDPWCSC GGLTPDGTLV VAGGFADGGK 180 TSRYYGGQPD CQDCDWREYP NKLQEPRWYA TQAILANGEY IVIGGRRSFS YEFFPKEGQP 240 SDKPIFFPFL YETSDIDENN LYPFVHLSSD GNLFIFANNR SLLLNPTTNK VVRTYPVLPG 300 GSRNYPASGM SSILPIKLDG TELSSASIKV EVLVCGGNSH DSFILAETEK IFKPAIKDCS 360 RMVITDPDPK WDSEEMPSGR TMGDSLVLPN GQILFINGAQ KGTAAWWDAD EPNFTPVLYF 420 SEKPKGQRFK VLKPSQIARM YHSTSAVLPS GKIWVGGSNT HDTYKDKDRF PTETRIEAFS 480 PPYLDPKLDK YRPQIVEESS EKKLMYGKNF ETQFKLQDTN QKLTKQDIKV SMYFPPFTTH 540 GYSMNQRLLF LKTFIAQNSE GTYKVTSKAP TFREVAPPGY YLLFIVHRGV PSKGMWVQIG 600 * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 3.0e-21 | 492 | 599 | 109 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-22 | 492 | 599 | 109 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 6.0e-96 | 87 | 337 | 251 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17686.1 | 0 | 87 | 391 | 1 | 305 | unknown [Glycine max] |
EMBL | CBI28031.1 | 0 | 63 | 599 | 93 | 622 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280698.1 | 0 | 63 | 599 | 117 | 646 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324431.1 | 0 | 73 | 599 | 2 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 73 | 599 | 89 | 608 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 6e-18 | 148 | 599 | 217 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2wq8_A | 7e-18 | 148 | 599 | 239 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 1t2x_A | 1e-17 | 148 | 599 | 217 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz3_A | 2e-17 | 148 | 599 | 217 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz1_A | 2e-17 | 148 | 599 | 217 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |