Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10043230 |
Family | AA5 |
Protein Properties | Length: 666 Molecular Weight: 73008.5 Isoelectric Point: 7.1254 |
Chromosome | Chromosome/Scaffold: 25 Start: 1906301 End: 1908468 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 132 | 664 | 0 |
VSPGAYNGEWELFSKNSGVSAMHSILLPKVDKVLMYDSTIWRISNIMLPNGVCRALAEETGEKDCYAHSVWFDTHLDNLIPLELKTDTWCSSGGLTLEGQ FVSTGGFQGGANTVRYLDTCEDCTWREYPTALSAPRWYSTQAQLADGRFIVVGGRDAHSFEYIPPEGKQNDKPFFLDLLKQTHDPEENNLYPFVFLSTDS NVFIFANNRSVLLNPNTNTVVKEFPVLPGGHRNYPASGMSVILPIDLDNPNSSPAAATVPAEVMVCGGSAHIDSYGKVSQGIFYETLEDCGRLKITDPNP VWERDLMPSPRIMGDMMLLPSGEVLIVNGAMRGASGWGFARDPNFTPLIYTPGAKFGTRFRQLTPSTIPRMYHSSTVVLPDARVMISGSNTNNGYIYDAT YPTELRVEKFSPPYLDPALAYKRPEIMNGEAIAKFRYKAKITIQAKLNPTVASIVLMNLKVTINVPGFSTHGVTMNQRLIMLGLDSANPTAGKDGVFDVV ARTPPNSAVAPTGYYMLSVVYQGVPSKAVWVQL |
Full Sequence |
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Protein Sequence Length: 666 Download |
MKNKASYYLI SLILLPALFM TAVVGTNTEG LFKRPRDFSL LNKEHVMGKH KLLGDPFGKP 60 NDFKSRKIPD DVGTPMDPAL KHVEQVAKEA QKEEKPQTLE LPNADDVGGG GKSKLGAKLK 120 DRFVGGGESP LVSPGAYNGE WELFSKNSGV SAMHSILLPK VDKVLMYDST IWRISNIMLP 180 NGVCRALAEE TGEKDCYAHS VWFDTHLDNL IPLELKTDTW CSSGGLTLEG QFVSTGGFQG 240 GANTVRYLDT CEDCTWREYP TALSAPRWYS TQAQLADGRF IVVGGRDAHS FEYIPPEGKQ 300 NDKPFFLDLL KQTHDPEENN LYPFVFLSTD SNVFIFANNR SVLLNPNTNT VVKEFPVLPG 360 GHRNYPASGM SVILPIDLDN PNSSPAAATV PAEVMVCGGS AHIDSYGKVS QGIFYETLED 420 CGRLKITDPN PVWERDLMPS PRIMGDMMLL PSGEVLIVNG AMRGASGWGF ARDPNFTPLI 480 YTPGAKFGTR FRQLTPSTIP RMYHSSTVVL PDARVMISGS NTNNGYIYDA TYPTELRVEK 540 FSPPYLDPAL AYKRPEIMNG EAIAKFRYKA KITIQAKLNP TVASIVLMNL KVTINVPGFS 600 THGVTMNQRL IMLGLDSANP TAGKDGVFDV VARTPPNSAV APTGYYMLSV VYQGVPSKAV 660 WVQLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 8.0e-19 | 554 | 664 | 112 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 8.0e-20 | 554 | 664 | 112 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 1.0e-102 | 153 | 399 | 251 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 115 | 664 | 56 | 593 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 115 | 664 | 56 | 593 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 139 | 665 | 2 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 12 | 665 | 8 | 609 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514260.1 | 0 | 11 | 665 | 7 | 613 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eib_A | 0.00000000000004 | 216 | 664 | 223 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eid_A | 0.00000000000006 | 216 | 664 | 223 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2wq8_A | 0.0000000000001 | 216 | 664 | 245 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 1t2x_A | 0.0000000000001 | 216 | 664 | 223 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 1k3i_A | 0.0000000000001 | 216 | 664 | 240 | 654 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |