| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra026364 |
| Family | AA6 |
| Protein Properties | Length: 293 Molecular Weight: 31203.6 Isoelectric Point: 4.498 |
| Chromosome | Chromosome/Scaffold: 01 Start: 9782942 End: 9784953 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 137 | 277 | 0 |
| TLPEDVLSKMSAPPKSDAPLITPNDLAEADGFVFAFPTRFGMMAAQFKAFLDSTGGLWRTQQLAGKPAAGIFYSTGSQGGGQETTALTAITQLVHHVMIF VPMGYTFGAGMFEMEKVKGGIPYGAGTFAGDGSRQPTEVGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 293 Download |
| MASPKSPTRP TQQNPEPSFH DFLPAMAGKL GGEGLIGELC NGFELLMDRG KGVFTFESLR 60 RNAAAVLGLG DLTDEDVRSM IKEGDFDCDG ALNQMEFCVL MFRLSPDLMD ASRCLVTEAI 120 EEEYGRMSEP PLFSLVTLPE DVLSKMSAPP KSDAPLITPN DLAEADGFVF AFPTRFGMMA 180 AQFKAFLDST GGLWRTQQLA GKPAAGIFYS TGSQGGGQET TALTAITQLV HHVMIFVPMG 240 YTFGAGMFEM EKVKGGIPYG AGTFAGDGSR QPTEVGIGVG ASIPPGEVHC RH* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03358 | FMN_red | 2.0e-9 | 162 | 238 | 77 | + NADPH-dependent FMN reductase. | ||
| pfam13833 | EF_hand_6 | 3.0e-14 | 50 | 104 | 55 | + EF-hand domain pair. | ||
| COG0655 | WrbA | 9.0e-19 | 138 | 276 | 144 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 2.0e-34 | 137 | 274 | 139 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 7.0e-41 | 137 | 274 | 139 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO12869.1 | 0 | 137 | 275 | 6 | 143 | putative quinone reductase [Vitis vinifera] |
| EMBL | CAA19721.1 | 0 | 137 | 278 | 49 | 189 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_194457.2 | 0 | 137 | 278 | 43 | 183 | quinone reductase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002283286.1 | 0 | 137 | 275 | 43 | 180 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002534445.1 | 0 | 137 | 275 | 43 | 180 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 5e-32 | 137 | 274 | 41 | 175 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 5e-32 | 137 | 274 | 41 | 175 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 6e-32 | 137 | 274 | 42 | 176 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 6e-32 | 137 | 274 | 42 | 176 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 6e-32 | 137 | 274 | 42 | 176 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB036058 | 156 | 137 | 292 | 0 |
| HS073177 | 173 | 103 | 275 | 0 |
| AV553406 | 139 | 137 | 275 | 0 |
| AV544869 | 142 | 137 | 278 | 0 |
| HS071813 | 172 | 103 | 274 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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