CAZyme Information

Basic Information
SpeciesVitis vinifera
Cazyme IDGSVIVT01029720001
FamilyCBM57
Protein PropertiesLength: 2194 Molecular Weight: 240793 Isoelectric Point: 4.9366
ChromosomeChromosome/Scaffold: 12 Start: 13721467 End: 13758979
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM57158017495.6e-30
  FAIKCGGPQITSSDQIVFERDSETLGPATYYVTDTNRWAFSNVGKFSGSNNYTSTSSSLFTNTLDSELFQTARISAGSLRYYGLGLKNGNYTLTLQFAET
  AIVNSNSWKTLGRRVFDIYIQGDLILKDFDIRKEAGGVSFQAVKKEFTAQVLENYIEIHLFWAGKGTCCV
CBM575036742.9e-31
  FAIKCGGPQITSSDQIVFERDNETLGPATYYVTDENRWAVSNVGLFSGSNNPQYTSTSSSQFTNTLDSELFQTARISAGSLRYYGLGLENGNYTLTLQFA
  ETAIVNSNSWKSLGRRVFDVYIQGDLVLKDFDIRKEAGGVSFQAVKKEFTAQVLENYIEIHLFWAGKGTCCV
Full Sequence
Protein Sequence     Length: 2194     Download
MIGLDIFDWA ISIGTQKKKI KDRSPQIVHW AFISNECARG LIFRLMRKRP QCVRSVTKSQ    60
KTTTEEKRER TTMDSVSWVF VALYGVYVIG LFHAAAAQST EANATTDPSE VTILNSIFQQ    120
WGISASNEWN TSGEPCTGAA LDSADIKNPG IKCDCSYDNA STCHITQLKV YALDVVGAIP    180
DELWNLTFLT NLNLGQNYLT GSLSASIGNL TSMQYLSLGI NALSGELPKE LGQLTDLRSI    240
AFGTNNFSGS LPSELGNLVK LEQLICCYCL TNQCYFDSSG LSGDIPSTFA NLQSLTTVWA    300
SDNELTGNIP DFIGNWSKLT VLRLQGNSFE GSIPSSFSNL TSLTDLRISD ISNGSSSSLE    360
FIKDMKSLST LIIRNNNISD AIPSNIGEYG SLTQLDLSFN NLSGQLPESL FNLSQLTYLF    420
LGNNQLTGSL PSQKSTSLLN IDLSYNGLSG SFPSWVDEEN LQLNLVANNF TLDSSNSSVL    480
PSGLNCLQQN FPCNRGSGIY YNFAIKCGGP QITSSDQIVF ERDNETLGPA TYYVTDENRW    540
AVSNVGLFSG SNNPQYTSTS SSQFTNTLDS ELFQTARISA GSLRYYGLGL ENGNYTLTLQ    600
FAETAIVNSN SWKSLGRRVF DVYIQGDLVL KDFDIRKEAG GVSFQAVKKE FTAQVLENYI    660
EIHLFWAGKG TCCVPAQGTY GPSISAISAT PDFEPTVSNT APNGKKNRTG LIVGIAVGLG    720
VVCFLSVFAL YYFVLRRKKP SENQDEELLG MDARPYTFSY AELKNATGDF SPSNKLGEGG    780
FGPVYKGTLS DGRVVAVKQL SVASHQGKKQ FVAEIATISA VQHRNLVKLY GCCIEGVNRS    840
LVYEYLENKS LDQALFGKGN GSLDLDWPTR YDICLGVARG LAYLHEESRV RIVHRDVKAS    900
NILLDYHRNP KISDFGLAKL YDDTKTHIST RVAGTIGYLA PEYAMRGHLT EKADVFGFGV    960
VALEIVSGRP NSDTSLEEEK TYLLEWAWQL HENNHEIELV DSRLSEFSEE EARRMIGVAL    1020
LCTQTSPTLR PPMSRAVAML SGDIEVSRVT TKPGYLTDWK FNDASSFMSE NSHFNSSTSI    1080
SMAADADLAK NAPYIQFIGV MKVNFALWLF ELLSRHCMAF SALVNLVKKY QWEIRLGQTR    1140
NELVKLNVSF GYVIGIQSVS CVFVALCSVY VTGLFHIAAA QTTEANATTD PSEVRVLNSI    1200
FRQWGISASS QWRTIGEPCT GAAIDSTSID SADYNFGIKC DCSYDNASTC HITQLKVYAL    1260
DVVGVIPDEL WNLTFLTSLN LGQNYLTGPL SASIGNLTSM QYLSLGINAL SGELPKELGQ    1320
LTDLRSFAFG TNNFSGSLPS EIGNLVKLEQ LYFDSSGVSG EIPSTFANLQ SLTIVWASDN    1380
ELTGNIPDFI GNWSKLTVLR LQGNSFEGPI PSSFSNLTSL TDLRVSDISN ASSSSLEFIK    1440
NMKLLSTLVL RNNNISDSIP SNIGEYGSLT QLDLSFNNLS GQLPESLFNL SQLTYLFLGN    1500
NQLTGTLPSL KSTSLLNIDL SYNGLSGSFP SWVDEENLQL NLVANNFTLD SSNSSVLPSG    1560
LNCLQQNFPC NRGSGIYYNF AIKCGGPQIT SSDQIVFERD SETLGPATYY VTDTNRWAFS    1620
NVGKFSGSNN YTSTSSSLFT NTLDSELFQT ARISAGSLRY YGLGLKNGNY TLTLQFAETA    1680
IVNSNSWKTL GRRVFDIYIQ GDLILKDFDI RKEAGGVSFQ AVKKEFTAQV LENYIEIHLF    1740
WAGKGTCCVP AQGTYGPSIS AISATPNFEP TVPNTAPNGK KHRTGLIVGI AVALGLVCFL    1800
AVFSVYYFVL RRKKPYENQD EELLGMEARP YTFSYAELKN ATGDFSPSNK LGEGGFGPVY    1860
KGTLSDGRVV AVKQLSVSSH QGKNQFVTEI KTISAVQHRN LVKLYGCCIE GVNRSLVYEY    1920
LENKSLDQAL FGEGNLDLVW QTRYDICLGV ARGLAYLHEE SRLRIVHRDV KASNILLDYY    1980
LNPKISDFGL AKLYDDTKTH ISTRVAGTIG YLAPEYAMRG HLTEKADVFG FGVVALEIVS    2040
GRPNSDTSLE EEKTYLLEWH TYRLWKLDLS ILAWQLHETN CELELVDSGL SEFSEEEATR    2100
MIGVALLCTQ TSPTLRPPMS HVVAMLSGDI EVSRVTTKPG YLTDWKFNDA SSFMSENSDL    2160
SSPSISMAVD TDCSALTVNK TESMRLLERA GEE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00221STYKc3.0e-46775983217+
cd00180PKc5.0e-47776965194+
cd00180PKc1.0e-4718512038192+
pfam11721Malectin7.0e-5815781762187+
pfam11721Malectin2.0e-63501687189+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAG50909.1090215232016AC069159_10 receptor protein kinase, putative [Arabidopsis thaliana]
GenBankAAG50909.10117121741987AC069159_10 receptor protein kinase, putative [Arabidopsis thaliana]
EMBLCBI20016.101219312193unnamed protein product [Vitis vinifera]
RefSeqXP_002267672.10981087321009PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002267672.101155218761024PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3tl8_H073610431317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_H0181121291317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G073610431317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G0181121291317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D073610431317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
7597
712734
11501172
17871809
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GT17869527879510720
GT178695289187021580
DN17251726779510610
DN172517278187021470
FE6926902927029930
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038m
Ciclev10014641mCiclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)