CAZyme Information

Basic Information
SpeciesVitis vinifera
Cazyme IDGSVIVT01037993001
FamilyCBM57
Protein PropertiesLength: 2283 Molecular Weight: 251775 Isoelectric Point: 6.1127
ChromosomeChromosome/Scaffold: 10 Start: 12136607 End: 12204378
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM57170318682.9e-30
  SIKCGGPEWRTPDGTVYEADNSITTGTASTSYYVSRLENWGVSNVGLYSDRIAYKTEVSGTNHPELFKTSRISPGSLRYYGLGLQNGHYTVSLQFAEMEL
  KDQSAQTWESIGRRVFDIYIQGTLQLKDFDITKEAGGVERAIERKFNAVVSQNYLEIHLFWAGKGT
CBM574346023.3e-32
  SVNCGGQEMRIADGTVYEVDNSSLGAASYYVTNTEKWAVSNVGLFSDSSNPAYLENNLKQVADTSTPELFQTSRVSPGSLRYYGLGLENGNYTVSLEFAE
  TKFASRSTETWESLGRRVFDIYIQGSLQLKDFDISKEAGGVDKALEKKFNATVSENYLEIHLFWAGKGT
Full Sequence
Protein Sequence     Length: 2283     Download
MNVTVKRASA SPSLPRCPSI IILFFLLWLF LLFQESTAEN ATLDPSEAEA LNSIFQQWDT    60
QSVALWNISG EPCTGSAING TAFESDDNNP AIKCDCSYDS GTTCHITQLR VYALNKKGVI    120
PEELATLTYL TFLKIDQNYF TGPLPSFIGN LSKLSLLSIA HNAFSGTIPK ELGNLTELEV    180
LSLGSNNFSG NLPPELGNLS KLRELYINSC GAGGEIPSTF AELLNLQVME GSDSPFTGKI    240
PNFIGNFTRL TSLRFQGNSF EGPIPSSFSK LISLSSLRIS DLYNVSSSLD FIRDLKNLTD    300
LNLRNALISG SIPSFTGEFQ KLQRLDLSFN NLTGEVPSSL FNSSALTDLF LGNNSLSGSL    360
PAQKSEELKN IDLSYNQLSG SFPSWVTSAS GLQLNLVANN FIFGSSNSSF FQGLNCLQRN    420
FPCNRNTPLY ANFSVNCGGQ EMRIADGTVY EVDNSSLGAA SYYVTNTEKW AVSNVGLFSD    480
SSNPAYLENN LKQVADTSTP ELFQTSRVSP GSLRYYGLGL ENGNYTVSLE FAETKFASRS    540
TETWESLGRR VFDIYIQGSL QLKDFDISKE AGGVDKALEK KFNATVSENY LEIHLFWAGK    600
GTCCIPVQGY YGPSISALSV VSDFTPSVSG IPSIPPSKKN NTGLIVGVVV AVGSVSFILI    660
CAVFYMKMRA SNINEDEELL GIGPRPNTFT YAELRTATED FNPTNKLGEG GFGPVYKGKL    720
NDERAVAVKQ LSVASHQGKS QFITEIATIS AVQHRNLVKL YGCCIEGDKR LLVYEYLENK    780
SLDQALFGKN DLHLDWATRF NVCMGTARGL AYLHEESRPR IVHRDVKASN ILLDAELCPK    840
ISDFGLAKLY DDKKTHISTR VAGTIGYLAP EYAMRGHLTE KADVFGFGVV ALEILSGRPN    900
SDNSLETEKI YLLEWAWTLH ESNRGLELVD PTLTAFDEDE ANRIIGVALL CTQSSPLLRP    960
TMSRAVAMLA GDIEISAVTV KPSYLTDWDF KDITSELLDE GDTQISVASK NGSAHDHGQY    1020
YNDDASKLAP SPINFTEPTL HETSETKFNF FIPRLPIFSL WRFLHECFYF HALINFILEI    1080
RALLSQSSIP VFPTAQFHPA TFSLSSYHHT THLTHSFIIS ITSYPRTYIR HTSPCLYSHT    1140
PSHPYIHDRD PTSISSSYPT PHLWSRHRIQ MCWREPLVLA AGLQRFALFT IRDCSIVVVS    1200
RYNMAMEILW DAIGARHAAL LTSNSQLHVD SLDDNMCGTT VITVLIRGRA IYVANSGDPR    1260
AVTVERKGKE IVAVDLSNDR YHPCRLLKST AQNATLHPSE GTCPSSISFS LSLSPSFLIH    1320
SLNSLFQKWD IEAVPLWNIS GEPCSGSAIN GTEFESEANS PAIKCDCSYD SNTTCHITQL    1380
RVHALNKRGV IVEEFKAFTY LMVLKLDKNY FTGPLPSFIG NLSQLTYLSV SHNALSGTIP    1440
KELGNLKELL MLSIGSNNFS GTLPPEIGNL VKLQQIYIDS SGVSGEIPST FAKLQDMVVM    1500
FATDVPITGK IPDFIGNWTK LESLRFQGNS LEGPIPSSFS KLTSLTTLRI SDLSNVSSSL    1560
DFIKEMKNLT DLVLRNSLIS GSIPFYIGEF QSLKTLDLSF NNLTGEIPDA LFNLSSLTSL    1620
FLGTNRLSGT FPAQKSEQLQ TIDLSYNELS GSFPSWLKSG LQLNLVANNL TFDSTNRSIF    1680
EGLECLQRNF PCNRDPPPYT NVSIKCGGPE WRTPDGTVYE ADNSITTGTA STSYYVSRLE    1740
NWGVSNVGLY SDRIAYKTEV SGTNHPELFK TSRISPGSLR YYGLGLQNGH YTVSLQFAEM    1800
ELKDQSAQTW ESIGRRVFDI YIQGTLQLKD FDITKEAGGV ERAIERKFNA VVSQNYLEIH    1860
LFWAGKGTCC IPFEGYYGPS ISALSVVSDL KRVPTTTPPK KGYTGLIAGI VAAIGILSFI    1920
LIICAVFYVK WKASNLNKDI VLLGVGPRPN TFRYAELRTA TENFSATNKL GEGGFGSVYK    1980
GTLPDGRVVA VKELTVASQH GKSQFITEIA TISAVQHRNL VKLYGFCIKG NRRLLVYEYL    2040
ENRSLDHSLF GKNNLHLDWP TRFNVCLATA RALAYLHEES RPRIVHRDVK ASNILLDEDL    2100
CPKISDFGLA KLYDDKKTHI STRIAGTIGY LAPEYAMRGH LTEKADVFSF GVVALEILSG    2160
RPNTDNSLDA KMIYLLEWAW ALHENNRSLD LIDPRLTAFD ENEAIRVVGV ALLCTQASPV    2220
LRPTMSRVVA MLAGDIEVST VASKPSYLTD WDFNDATSSF LSEDTQTSSA FNKSAIIQRL    2280
PL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00180PKc2.0e-46707894192+
smart00219TyrKc2.0e-48706896197+
cd00180PKc3.0e-4919702187222+
pfam11721Malectin1.0e-57432618190+
pfam11721Malectin2.0e-5817001884187+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI39030.101228212282unnamed protein product [Vitis vinifera]
RefSeqXP_002272816.1049104161001PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002272816.10131922755961PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002273016.101104211042PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002273016.1012882270351008PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A01952223520309B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3ulz_A068997220309B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3uim_A01952223520309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3uim_A068997220309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H01952223528317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
1032
644666
19071929
Signal Peptide
Cleavage Site
38
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CF2082432516579070
CF208243249192121690
DT5531062876849700
DT553106287194722330
DT5569162767179920
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038m
Ciclev10014641mCiclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)