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Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01024804001 |
Family | GT35 |
Protein Properties | Length: 844 Molecular Weight: 95489.6 Isoelectric Point: 6.2941 |
Chromosome | Chromosome/Scaffold: 6 Start: 6813839 End: 6831126 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 117 | 838 | 0 |
ALNKLGHGLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKEGQEEIAEDWLEKFSPWEVVRHDVVFPVRFFGHVAVSP SGSRKWIGGEVMKALAYDVPIPGYKTKNTISLRLWEAKAGAEDFNLFQFNDGQYEVAAQLHSQAQQICAVLYPGDATESGKLLRLKQQFFLCSASLQDII FRFKERKDGGSWQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDDEGLAWDEAWDVTSRTIAYTNHTVLPEALEKWSQVVMWKLLPRHMEIIEEIDKRFIT MIRSSRTDLESKIPNMCILDNNPQKPVVRMANLCVVSAHSVNGVAQLHSDILKAELFADYVSIWPTKFQNKTNGITPRRWLRFCSPELSNIISKWLKTDE WVTNLDKLANLRKFSDNEEFQAEWASAKMANKQRLAQYILQVTGESIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPEERKNTTPRTIMIGG KAFATYTNAKRIVKLVNDVGAVVNTDPEVNEYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEEN FFLFGATADEVPKLRKKREAGLFKPDPRFEEAMQFIRTGAFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPGYMDAQARVDEAYKDRKRWLKMSILSTA GSGKFSSDRTIAQYAKEIWNIE |
Full Sequence |
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Protein Sequence Length: 844 Download |
MATKKANNGS AAPGIPAEIP AIAHPLAEEP AEIASNINYH VQYSPHFSPF KFEPEQAYYA 60 TAESVRDRLI QQWNDTYVHY HKTDPKQTYY LSMEYLQGRA LTNAIGNLNI QDAYADALNK 120 LGHGLEEIAE QEKDAALGNG GLGRLASCFL DSMATLNLPA WGYGLRYRYG LFKQKITKEG 180 QEEIAEDWLE KFSPWEVVRH DVVFPVRFFG HVAVSPSGSR KWIGGEVMKA LAYDVPIPGY 240 KTKNTISLRL WEAKAGAEDF NLFQFNDGQY EVAAQLHSQA QQICAVLYPG DATESGKLLR 300 LKQQFFLCSA SLQDIIFRFK ERKDGGSWQW SEFPSKVAVQ LNDTHPTLAI PELMRLLMDD 360 EGLAWDEAWD VTSRTIAYTN HTVLPEALEK WSQVVMWKLL PRHMEIIEEI DKRFITMIRS 420 SRTDLESKIP NMCILDNNPQ KPVVRMANLC VVSAHSVNGV AQLHSDILKA ELFADYVSIW 480 PTKFQNKTNG ITPRRWLRFC SPELSNIISK WLKTDEWVTN LDKLANLRKF SDNEEFQAEW 540 ASAKMANKQR LAQYILQVTG ESIDPNSLFD IQVKRIHEYK RQLLNILGAI YRYKKLKEMS 600 PEERKNTTPR TIMIGGKAFA TYTNAKRIVK LVNDVGAVVN TDPEVNEYLK VVFVPNYNVS 660 VAEVLIPGSE LSQHISTAGM EASGTSNMKF ALNGCLIIGT LDGANVEIRE EIGEENFFLF 720 GATADEVPKL RKKREAGLFK PDPRFEEAMQ FIRTGAFGSY DYNPLLESLE GNSGYGRGDY 780 FLVGHDFPGY MDAQARVDEA YKDRKRWLKM SILSTAGSGK FSSDRTIAQY AKEIWNIEEC 840 PVP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 36 | 837 | 810 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 37 | 837 | 809 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 117 | 839 | 728 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
COG0058 | GlgP | 0 | 36 | 838 | 807 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
PRK14985 | PRK14985 | 0 | 90 | 835 | 754 | + maltodextrin phosphorylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM29154.1 | 0 | 1 | 840 | 1 | 837 | starch phosphorylase type H [Citrus hybrid cultivar] |
DDBJ | BAG31926.1 | 0 | 1 | 843 | 1 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
RefSeq | XP_002280732.1 | 0 | 1 | 843 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 2 | 843 | 4 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 2 | 843 | 3 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 27 | 838 | 22 | 829 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2gj4_A | 0 | 27 | 838 | 10 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4el5_A | 0 | 27 | 838 | 10 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4el0_A | 0 | 27 | 838 | 10 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4eky_A | 0 | 27 | 838 | 10 | 817 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 411 | 173 | 583 | 0 |
HO418036 | 539 | 243 | 759 | 0 |
HO586252 | 553 | 291 | 842 | 0 |
HO613954 | 499 | 395 | 844 | 0 |
EL450777 | 329 | 356 | 684 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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