y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000123354 |
Family | GT35 |
Protein Properties | Length: 835 Molecular Weight: 94857.1 Isoelectric Point: 6.2946 |
Chromosome | Chromosome/Scaffold: 007269339 Start: 30162 End: 35529 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 119 | 830 | 0 |
ALNKLGHQLEEITEQEKDAALGNGGLGRLASCFLDSMATLKYGLFKQRIAKDGQEETAEDWLEKFSPWEVVRHDVVYPVRFFGXVHVNPDGSRKWVEGEV LRALAYDVPIPGYKTKNTISLRLWEAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDATEEGKLLRLKQQFFLCSASLQDIIFRFKERKQGTD SLQWSEFXKKVAVQMNDTHPTLAIPELMRLLLDEEGLAWDEAWEVTTRTVAYTNHTVLPEALEKWSQTVMWKLLPRHMEIIEEIDXRFIAMVRATRTDLE SKIPSLCVLDNNPQKPVVRMANLCVVSAHTVNGVAQLHSDILKNELFVDYVSIWPTKFQNKTNGITPRRWLRFCSPELSNIITKWLKTDEWVTNLDLLVG LRKFADDSKLQEEWASAKMANKKRLAQYIEHVAGVKIDPNSLFDIQVKRIHEYKRQLLNILGAVYRYKKLKEMSPEERKKTTPRTIMIGGKAFATYTNAK RIVKLVDDVGAVVNKDPDVNXYLKVVFVPNYNVSVAEILIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEDNFFLFGATADE VPNLRKDREIGLFKPDPRFEEAKQFVRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGHDFAQYMDAQAKVDEAYKDXKRWQKMSILSTAGSGKFSSDXX IAQYAKEIWNIE |
Full Sequence |
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Protein Sequence Length: 835 Download |
MAPTAKSDGK TIIDSAISSK IPATANPLAE EPSQIASNIN YHAKFSPHFS PFKFEPEQAY 60 YATADSVRDR LIQQWNETYL HFHQENPKQT YYLSMEYLQG RALTNAIGNL NVQSAYADAL 120 NKLGHQLEEI TEQEKDAALG NGGLGRLASC FLDSMATLKY GLFKQRIAKD GQEETAEDWL 180 EKFSPWEVVR HDVVYPVRFF GXVHVNPDGS RKWVEGEVLR ALAYDVPIPG YKTKNTISLR 240 LWEAKASAED FNLFQFNDGQ YESAAQLHSR AQQICAVLYP GDATEEGKLL RLKQQFFLCS 300 ASLQDIIFRF KERKQGTDSL QWSEFXKKVA VQMNDTHPTL AIPELMRLLL DEEGLAWDEA 360 WEVTTRTVAY TNHTVLPEAL EKWSQTVMWK LLPRHMEIIE EIDXRFIAMV RATRTDLESK 420 IPSLCVLDNN PQKPVVRMAN LCVVSAHTVN GVAQLHSDIL KNELFVDYVS IWPTKFQNKT 480 NGITPRRWLR FCSPELSNII TKWLKTDEWV TNLDLLVGLR KFADDSKLQE EWASAKMANK 540 KRLAQYIEHV AGVKIDPNSL FDIQVKRIHE YKRQLLNILG AVYRYKKLKE MSPEERKKTT 600 PRTIMIGGKA FATYTNAKRI VKLVDDVGAV VNKDPDVNXY LKVVFVPNYN VSVAEILIPG 660 SELSQHISTA GMEASGTSNM KFALNGCLII GTLDGANVEI REEIGEDNFF LFGATADEVP 720 NLRKDREIGL FKPDPRFEEA KQFVRSGAFG SYDYNPLLDS LEGNTGYGRG DYFLVGHDFA 780 QYMDAQAKVD EAYKDXKRWQ KMSILSTAGS GKFSSDXXIA QYAKEIWNIE ECRVP 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 36 | 829 | 814 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 39 | 829 | 810 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 119 | 831 | 729 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14985 | PRK14985 | 0 | 92 | 827 | 752 | + maltodextrin phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 56 | 830 | 791 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM29154.1 | 0 | 5 | 834 | 4 | 839 | starch phosphorylase type H [Citrus hybrid cultivar] |
DDBJ | BAG31926.1 | 0 | 4 | 835 | 3 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
RefSeq | XP_002280732.1 | 0 | 16 | 835 | 14 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 13 | 835 | 20 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 835 | 1 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3t3i_A | 0 | 29 | 833 | 21 | 831 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3t3h_A | 0 | 29 | 833 | 21 | 831 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3t3g_A | 0 | 29 | 833 | 21 | 831 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3t3e_A | 0 | 29 | 833 | 21 | 831 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 3t3d_A | 0 | 29 | 833 | 21 | 831 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 412 | 164 | 575 | 0 |
HO418036 | 539 | 234 | 751 | 0 |
HO586252 | 552 | 282 | 832 | 0 |
HO613954 | 498 | 387 | 835 | 0 |
GT044838 | 338 | 469 | 806 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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