Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G239600.6 |
Family | GH5 |
Protein Properties | Length: 456 Molecular Weight: 50517.1 Isoelectric Point: 7.1958 |
Chromosome | Chromosome/Scaffold: 09 Start: 19103080 End: 19105756 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 213 | 419 | 2.6e-37 |
ENAPQVMREHWRTFIVEKDFKFISQNGLNAVRIPVGWWIASDPTPPPPFVGGSLQALDNAFQWAKKYGLKVIIDLHAAPGSQNGWEHSGSRDSSQEWGKT DETITQTVAVIDFLASRYANSPSLYAVELINEPLSPGATLSSVIEYYKAGYAAVRRHTSTAFVVMSNRLGPMKPRELFPIASGFKRSVIDVHYYNLFEDM FNNMTVQ |
Full Sequence |
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Protein Sequence Length: 456 Download |
MLVSSTMHLL SMCVLSLVLS CCQGREDPNF RIRAVNLGGW LVTEGWIKPS LFDGIVNKDF 60 LDGTALQFKS VTTGKYLSAE QGGGSIIVAN RTTASGWETF RLWRINETAF NFRVFGKQFI 120 GVDTDGNGIG IVAISKAPGH SETFEILRNS DDKNRVRIKA SNGYYLQAKT EEVVTADSQG 180 NKGWGDDDPS VFVMKMTGRL EGEFQVTNGY GPENAPQVMR EHWRTFIVEK DFKFISQNGL 240 NAVRIPVGWW IASDPTPPPP FVGGSLQALD NAFQWAKKYG LKVIIDLHAA PGSQNGWEHS 300 GSRDSSQEWG KTDETITQTV AVIDFLASRY ANSPSLYAVE LINEPLSPGA TLSSVIEYYK 360 AGYAAVRRHT STAFVVMSNR LGPMKPRELF PIASGFKRSV IDVHYYNLFE DMFNNMTVQQ 420 NIDFVYNNRS SQLNYVTTSN GPLTFVGKNG WSVLM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 9.0e-9 | 68 | 178 | 111 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 6.0e-11 | 222 | 406 | 192 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 1.0e-29 | 222 | 368 | 149 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18831.1 | 0 | 6 | 448 | 12 | 447 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 6 | 448 | 12 | 447 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 6 | 448 | 12 | 447 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285806.1 | 0 | 1 | 448 | 1 | 450 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002513884.1 | 0 | 1 | 448 | 1 | 448 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 2e-32 | 203 | 409 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 3e-32 | 203 | 409 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 3e-32 | 203 | 409 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |