| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna24842.1-v1.0-hybrid |
| Family | CBM57 |
| Protein Properties | Length: 1790 Molecular Weight: 197989 Isoelectric Point: 7.5701 |
| Chromosome | Chromosome/Scaffold: 3 Start: 3842654 End: 3876379 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 324 | 449 | 6.3e-21 |
| HINCGGKQTTIGGIKYEEDEASGGAATFVQATPQNWGFSSTGEFVDPEANGNYTVKLHFAEIVLRDNRSYYGVGRRMFDVYIQDKLVLKDFDIRKEAMGV NKEVIKVFNAVVNVKTLLIRFQWAGR | |||
| CBM57 | 1334 | 1493 | 2.3e-26 |
| HINCGGKPITIGSIKYEGDEASGGAAKFFQDTVNWGFSSTGDYGVMNVDQAYIANNISILKMNNSELYRTARLSFLSLTYYARCLANGNYTVKLHFAEIV LRDNRSYYGVGTRFFDVYIQEKLVLKDFNIEKEAQGVDKEVIKVFKAVVNVSTLEIRFYW | |||
| CBM57 | 782 | 946 | 4.9e-30 |
| HINCGGKQTTIGGIKYEGDEASGGAATFVQATPPNWGFSSTGDFVDAWSSENDYIANNVSILKMNNSELYKTARLSPLSLTYYAHCLANGNYTVKLHFAE IVLRDNRSYYGVGRRMFDVYIQDKLVLKDFDIRKEALGIDKEVIKEFKAVVNVKTLQIRFQWAGR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1790 Download |
| MAIGAGLFLP NSGGKTIMNL IVVVMLVISC DNGLVEVEAL TTLLPASEVA ALKEIATQIG 60 KTDWDFSVDP CLNDTTHTSW ATPKSADRPL FNNTLTCNCS FPDGSCHVIN IILRGQDLAG 120 VLPPSIAKLP YLTQIDFTRN FLSGNIPSEW GSTKLEYMSF NVNNLTGPIP AFLGNITTLR 180 YLNLETNMFN GTVPPELGNL VNLQNLILTG QDLDGVLPAS LAKLPYLKQV NLLRNDLSGS 240 IPREWASTKL EYLDLSFNRL EGTIPNFANI MQLSTISGTQ SLTSLFFWVS RQTATVVMLS 300 LGLLFTASFF LRYAHPPPDQ YSLHINCGGK QTTIGGIKYE EDEASGGAAT FVQATPQNWG 360 FSSTGEFVDP EANGNYTVKL HFAEIVLRDN RSYYGVGRRM FDVYIQDKLV LKDFDIRKEA 420 MGVNKEVIKV FNAVVNVKTL LIRFQWAGRG TTNVPRRGIY GSLISAISVQ SDFKPPDDSK 480 RTIYIVVAVV SALCLLFLII GILWLRGCFG HKTTREEELR GLDLQTGYFK FKQIKAATNN 540 FDPANKLGEG GFGAVYKVFT LLTSIVKICG YQGRMAEVLN SQKPVLFSYV AVFVVLICIG 600 PIKSQAQSGT LATEEGKASY FGISVSNVKA LREIAEQLNK KDWNFSDPCS NVPTFSSPHA 660 DQYNNTLVCN CSFSGNICHI QSIYLMGQDL DGVLPASLAK LPYLKQVNLG QNDLNGLIPR 720 EWASTKLEFL VLSVNNLSGP IPGYLGNITT LRALALEGNL FSGPVPSDLG KLINMENQFS 780 LHINCGGKQT TIGGIKYEGD EASGGAATFV QATPPNWGFS STGDFVDAWS SENDYIANNV 840 SILKMNNSEL YKTARLSPLS LTYYAHCLAN GNYTVKLHFA EIVLRDNRSY YGVGRRMFDV 900 YIQDKLVLKD FDIRKEALGI DKEVIKEFKA VVNVKTLQIR FQWAGRGTTN VPRRGKYGSL 960 ISAISVQSDF KPPDDSKTKI YIVVGVVSAL CLIFLIIGIL WFRGCFGHKT TREEELRGMD 1020 LHTGFFRFKQ IKAATDNFNP ANKLGEGGFG AVYKNLLGSD FREVNIGDFG RRRHQGSPTT 1080 NQPLRRVPPC VEMVIFFMVV ICMAQITFEA EAMSLPADEV QALQEIAEQL NKKDWNLSDP 1140 CRNVPTFSIP HADQYYNTLF CNCSFSGNVC HVQTIYLVGQ DLDGVLPPSL VKLPYLKELN 1200 LGQNYLSGTI PPEWGSTKLE FLVLSVNNLS GPIPAFLGNI TTLRSLALES NQFSGNIPPE 1260 LGRLVNMEVL YLRANNLIGQ LPVTLTNMTK LNTLDLSFNR LEGSIPNLDN LIRLATIILC 1320 NCLYPCSKEQ YSLHINCGGK PITIGSIKYE GDEASGGAAK FFQDTVNWGF SSTGDYGVMN 1380 VDQAYIANNI SILKMNNSEL YRTARLSFLS LTYYARCLAN GNYTVKLHFA EIVLRDNRSY 1440 YGVGTRFFDV YIQEKLVLKD FNIEKEAQGV DKEVIKVFKA VVNVSTLEIR FYWAGKGTTN 1500 SPRRGTFGSL ISAISVESDF KPPGDSNRIM FIVIGVALVL CLIFMVFGIL WLRSFFGGKT 1560 SREQELKGLD LQTGLFRFKQ IKAATNNFDA ANKLGEGGFG IVYKVFSDSF LLKGYMAPEY 1620 ALWGYLTDKV DVYSFGVVAL ELVSGKNIKF RSNENYVCLL DWALILQQKE NLMELVDPKL 1680 GSKFNKEQAM RMIKVALLCT NPSPALRPTM SAALSMLEGR AVIHESSRNL SMYGDELGSM 1740 ASRDDSNDLN IQHSPSETRS LIYLSDAKGP EASSSRTIHD NYTFNLESP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 6.0e-25 | 1163 | 1306 | 150 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-26 | 95 | 277 | 186 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 8.0e-42 | 321 | 467 | 169 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 3.0e-52 | 1331 | 1514 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 1.0e-52 | 780 | 964 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ulz_A | 2e-17 | 1579 | 1719 | 158 | 308 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3uim_A | 2e-17 | 1579 | 1719 | 158 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
