Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.004G034400.1 |
Family | GT35 |
Protein Properties | Length: 986 Molecular Weight: 111076 Isoelectric Point: 5.0059 |
Chromosome | Chromosome/Scaffold: 04 Start: 3806057 End: 3816472 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 180 | 504 | 0 |
ALSKLGYKLENVAFQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQRITKEGQEEVAEDWLEMGSPWEIVRNDVSYPVKFYGKVVSGS DGKKHWIGGEEIKAVAHDVPIPGYKTKTTINLRLWSTKAASEEFDLYAFNAGRHNEASEALANAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDII ACFERRSGANLNWEEFPEKVAVQMNDTHPTLCIPELMRILIDVKGLSWKDAWNITQRTVAYTNHTVLPEALEKWSLDLMQKLLPRHIEIIEMIDEELIGT IIAEYGTADSDLLENKLKEMRILEN | |||
GT35 | 582 | 980 | 0 |
PKLVRMANLCVVGGHAVNGVAEIHSEIVKDEVFNAFYKLWPEKFQNKTNGVTPRRWIKFCNPLLSKIITEWIGTEDWVLNTEKLAELRKFVENEDLQLQW REAKRSNKVKVAAFIREKTGYFVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSPVERKANFVPRVCIFGGKAFATYVQAKRIVKFITDVGETV NHDPEIGDLLKVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGADNFFLFGAEAPEIAGLRKERAEGKF VPDPRFEEVKEFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKKWTRMSILNTAGSYKFSSDRTIHEYAREIWNIE |
Full Sequence |
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Protein Sequence Length: 986 Download |
MASTTMRLSA TSAGAQALPR RNSLAVLLTV SARSSAKSRL RFIGRSSNLS FLRRRNSFSA 60 VKCVSGSEAR KTLHDPVAQQ QAASSLSSST PDASSIASSI KYHAEFTPLF STHNFDLPQA 120 FFATAQSVHD ALIINWNATY DYYEKLNVKQ AYYLSMEFLQ GRALLNAIGN LELTGAYAEA 180 LSKLGYKLEN VAFQEPDAAL GNGGLGRLAS CFLDSLATLN YPAWGYGLRY KYGLFKQRIT 240 KEGQEEVAED WLEMGSPWEI VRNDVSYPVK FYGKVVSGSD GKKHWIGGEE IKAVAHDVPI 300 PGYKTKTTIN LRLWSTKAAS EEFDLYAFNA GRHNEASEAL ANAEKICYIL YPGDESIEGK 360 TLRLKQQYTL CSASLQDIIA CFERRSGANL NWEEFPEKVA VQMNDTHPTL CIPELMRILI 420 DVKGLSWKDA WNITQRTVAY TNHTVLPEAL EKWSLDLMQK LLPRHIEIIE MIDEELIGTI 480 IAEYGTADSD LLENKLKEMR ILENVELPEE FADVLVKSKE TTDIPSEEPQ SSEQVEEEEE 540 EEKKKDDDND EVEGALAEKK GTDESSIEDE KEELPVPVPE PPKLVRMANL CVVGGHAVNG 600 VAEIHSEIVK DEVFNAFYKL WPEKFQNKTN GVTPRRWIKF CNPLLSKIIT EWIGTEDWVL 660 NTEKLAELRK FVENEDLQLQ WREAKRSNKV KVAAFIREKT GYFVSPDAMF DIQVKRIHEY 720 KRQLMNILGI VYRYKKMKEM SPVERKANFV PRVCIFGGKA FATYVQAKRI VKFITDVGET 780 VNHDPEIGDL LKVIFVPDYN VSVAEMLIPA SELSQHISTA GMEASGTSNM KFAMNGCILI 840 GTLDGANVEI REEVGADNFF LFGAEAPEIA GLRKERAEGK FVPDPRFEEV KEFVRSGVFG 900 SYNYDELIGS LEGNEGFGRA DYFLVGKDFP SYIECQEKVD EAYRDQKKWT RMSILNTAGS 960 YKFSSDRTIH EYAREIWNIE PAQLP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00343 | Phosphorylase | 2.0e-128 | 180 | 503 | 324 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 5.0e-174 | 100 | 465 | 369 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 586 | 979 | 399 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
pfam00343 | Phosphorylase | 0 | 586 | 981 | 401 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 0 | 586 | 979 | 399 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ11757.1 | 0 | 60 | 985 | 5 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
Swiss-Prot | P27598 | 0 | 52 | 985 | 34 | 955 | PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
Swiss-Prot | P53536 | 0 | 1 | 984 | 1 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002305367.1 | 0 | 52 | 985 | 7 | 949 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 32 | 985 | 28 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 583 | 983 | 438 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1z8d_A | 0 | 76 | 503 | 4 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el5_A | 0 | 583 | 983 | 426 | 820 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el5_A | 0 | 92 | 503 | 12 | 421 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el0_A | 0 | 583 | 983 | 426 | 820 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 867 | 120 | 986 | 0 |
HO797178 | 423 | 564 | 986 | 0 |
HO620767 | 401 | 586 | 986 | 0 |
HO613954 | 401 | 586 | 986 | 0 |
HO778303 | 123 | 1 | 122 | 5e-34 |
Sequence Alignments (This image is cropped. Click for full image.) |
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