Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G170700.2 |
Family | GH89 |
Protein Properties | Length: 785 Molecular Weight: 89297.9 Isoelectric Point: 8.5962 |
Chromosome | Chromosome/Scaffold: 04 Start: 47025703 End: 47032781 |
Description | alpha-N-acetylglucosaminidase family / NAGLU family |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH89 | 108 | 346 | 0 |
GPEILIKGTTAVEIASGLHWYIKYFCGAHVSWDKTGGVQLASVPKPGSLPLVKDGGVLIQRPVPWNYYQNVVTSSYSYVWWDWERWEKEIDWMALQGINL PLAFSGQEAIWQKVFMGFNISMEDLNDFFGGPAFLAWARMGNLHTWGGPLSKNWLKQQLVLQKKILSRMVELGMTPVLPSFSGNVPAALKTIFPTANITR LGDWNTVDGDPHWCCTYLLNPSDPLFVEIGEAFIKMQIK | |||
GH89 | 346 | 780 | 0 |
KAMSNGDKDAVWLMQGWLFYSDSTFWKPPQMKALLHSVPVGKMIVLDLFADVKPIWATSSQFYGTPYVWCLLHNFGGNIEMYGTLDAISSGPVDARISKN STMVGVGMCMEGIEQNPVVYELMSEMAFRKEKVQVLEWLKTYTHRRYGKSVQQIKEAWAILYHTVYNCTDGIADHNIDFIVKFPDWDPSINFGSRPSKLN SMHTFRLRTRSRRFSFQERSSDLPQAHLWYSTHEVVSALKLFLAAGNDLAGSLTYRYDLVDLTRQVLSKLANQVYLDAINAFRRKDVKALNIHSQKFIQL IKDIDVLLASDDNFLLGTWLESAKLLAENPSEMRQYEWNARTQVTMWFDTTPTNQSKLHDYANKFWSGLLEGYYLPRASSYFSYLSKSLEKNESFKLVEW RKQWVSFSNKWQAGLELYPVKAQGNFLTIAKALFD |
Full Sequence |
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Protein Sequence Length: 785 Download |
MAVAIIRILN NSPTMKFIIG DVLIIIFILF ITRLPQSFST TEAIQPSLTR LDSKRSSPSV 60 QESAAKAVLG RLLPTHLLSF HFKIVSKDVC GGQGCFLIEN YDGPTENGPE ILIKGTTAVE 120 IASGLHWYIK YFCGAHVSWD KTGGVQLASV PKPGSLPLVK DGGVLIQRPV PWNYYQNVVT 180 SSYSYVWWDW ERWEKEIDWM ALQGINLPLA FSGQEAIWQK VFMGFNISME DLNDFFGGPA 240 FLAWARMGNL HTWGGPLSKN WLKQQLVLQK KILSRMVELG MTPVLPSFSG NVPAALKTIF 300 PTANITRLGD WNTVDGDPHW CCTYLLNPSD PLFVEIGEAF IKMQIKAMSN GDKDAVWLMQ 360 GWLFYSDSTF WKPPQMKALL HSVPVGKMIV LDLFADVKPI WATSSQFYGT PYVWCLLHNF 420 GGNIEMYGTL DAISSGPVDA RISKNSTMVG VGMCMEGIEQ NPVVYELMSE MAFRKEKVQV 480 LEWLKTYTHR RYGKSVQQIK EAWAILYHTV YNCTDGIADH NIDFIVKFPD WDPSINFGSR 540 PSKLNSMHTF RLRTRSRRFS FQERSSDLPQ AHLWYSTHEV VSALKLFLAA GNDLAGSLTY 600 RYDLVDLTRQ VLSKLANQVY LDAINAFRRK DVKALNIHSQ KFIQLIKDID VLLASDDNFL 660 LGTWLESAKL LAENPSEMRQ YEWNARTQVT MWFDTTPTNQ SKLHDYANKF WSGLLEGYYL 720 PRASSYFSYL SKSLEKNESF KLVEWRKQWV SFSNKWQAGL ELYPVKAQGN FLTIAKALFD 780 KYLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12971 | NAGLU_N | 3.0e-22 | 61 | 159 | 99 | + Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This N-terminal domain has an alpha-beta fold. | ||
pfam12972 | NAGLU_C | 1.0e-104 | 482 | 782 | 301 | + Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold. | ||
pfam05089 | NAGLU | 2.0e-155 | 174 | 477 | 339 | + Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This central domain has a tim barrel fold. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA77084.1 | 0 | 23 | 784 | 9 | 811 | alpha-N-acetylglucosaminidase [Nicotiana tabacum] |
EMBL | CBI24942.1 | 0 | 4 | 784 | 53 | 868 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196873.1 | 0 | 48 | 783 | 32 | 805 | alpha-N-acetylglucosaminidase family / NAGLU family [Arabidopsis thaliana] |
RefSeq | XP_002273084.1 | 0 | 23 | 784 | 4 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314048.1 | 0 | 37 | 783 | 22 | 805 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vcc_A | 0 | 66 | 782 | 175 | 877 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
PDB | 2vcb_A | 0 | 66 | 782 | 175 | 877 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
PDB | 2vca_A | 0 | 66 | 782 | 175 | 877 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
PDB | 2vc9_A | 0 | 66 | 782 | 175 | 877 | A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens In Complex With 2-Acetamido-1,2-Dideoxynojirmycin |
PDB | 4a4a_A | 0 | 66 | 782 | 198 | 900 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |