| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna08285.1-v1.0-hybrid |
| Family | AA3 |
| Protein Properties | Length: 552 Molecular Weight: 60506.7 Isoelectric Point: 8.1737 |
| Chromosome | Chromosome/Scaffold: 2 Start: 13189848 End: 13193322 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 186 | 547 | 6.4e-25 |
| SIYVPRNSSADHYCGSCNYGCPTGDKQGTDSTWLVDAVKCGAVILTGCKAERFIMENDHQGGTSRKRCLGVQAISLCKNITKKLQIEAKVTISACGSLLT PPLMITSGLKNPNIGRNLHLHPVLLAWGYFPEDSSEFKGKTFEGGIITSLHKVVSENNQNVRAIVETPAIGPASFATLVPWVSGLDMKDRMAKYARTAHL FALVRDKGSGEVRAENKIEYRLDRSDKENIQAGLRQAVRILIAAGAVEVGTYRNDGQRIVCKGTKKEDLEEFLDSVIAVGGPSTRGEHWTMYSSAHQMGS CKMGATEKEGGVDENGESWEAKGLFVCDGSLLPTAVGVNPMITIQSTAYCLSKKIADSLKKR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 552 Download |
| MEERENSHHP LLSGVRSSKF SHGFSAAQIQ SLAAMCEALI PPLSLDDTSD QALHSFYKAS 60 GSEPPIPDEV ADLIKKRGVP EAVGLLSFFL KVLSYRLGTL LVCGYPCLDR KGPFIHNFAE 120 MSLEKREEAL QRWSREKRLI PLRLLFVVVK IFCFFCFFSR VSKLDGVDEG ALLVRTLKLR 180 TCEDFSIYVP RNSSADHYCG SCNYGCPTGD KQGTDSTWLV DAVKCGAVIL TGCKAERFIM 240 ENDHQGGTSR KRCLGVQAIS LCKNITKKLQ IEAKVTISAC GSLLTPPLMI TSGLKNPNIG 300 RNLHLHPVLL AWGYFPEDSS EFKGKTFEGG IITSLHKVVS ENNQNVRAIV ETPAIGPASF 360 ATLVPWVSGL DMKDRMAKYA RTAHLFALVR DKGSGEVRAE NKIEYRLDRS DKENIQAGLR 420 QAVRILIAAG AVEVGTYRND GQRIVCKGTK KEDLEEFLDS VIAVGGPSTR GEHWTMYSSA 480 HQMGSCKMGA TEKEGGVDEN GESWEAKGLF VCDGSLLPTA VGVNPMITIQ STAYCLSKKI 540 ADSLKKRLVV D* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.008 | 394 | 529 | 139 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 9.0e-17 | 197 | 547 | 388 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 7.0e-20 | 403 | 536 | 134 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 8.0e-42 | 189 | 308 | 122 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3nne_H | 0.0000003 | 228 | 529 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0000003 | 228 | 529 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0000003 | 228 | 529 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_E | 0.0000003 | 228 | 529 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_D | 0.0000003 | 228 | 529 | 225 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
