| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g03780.2 |
| Family | GH51 |
| Protein Properties | Length: 658 Molecular Weight: 73467.8 Isoelectric Point: 4.5054 |
| Chromosome | Chromosome/Scaffold: 11 Start: 1484073 End: 1491763 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 220 | 530 | 0 |
| FDQVSLMPSDTYKGHGFRKELLYMLLELKPQFLRFPGGCFVEGDWLRNAFRWRETIGPWEQRPGHFGDVWNYWTDDGLGYYEFLQLSEDLGAAPIWVFNV GISHHDEVDTTIIEPFVKDVLDSLEFARGRAESTWGSVRAAMGHPERFPLKYVAIGNEDCDKGFYRGNYLKFYDAIRKAYPDIQMISNCDGSSRPLDHPA DLYDFHVYTSAANLFIMKNKFDRTSRIGSKVFVSEYAVNEQRDAGKGSLLASLAEAAFLTGLEKNSDLVQMASYAPLFVNDNDRTWNPDAIVFNSWQQYG TPSYWMQTYFR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 658 Download |
| MGFEETYFSA FCYLLLFSVS WKCQAAELDM AQTAVLEVDA SWNLSRKIPD TLFGLFFEEI 60 NHAGAGGIWA ELVSNRGFEA GGPHTPSNID PWSIIGDESS IYVTTDCSSC FRQNIVALRM 120 EILCDNCPAG GVGIYNPGFW GMNIEEGKAY NLVMYIRSLE SVELTASLTC SDGMQNLASV 180 SIQGIDLSNW TKIELQLLAE GTCRTSRLEL TSMKKGIIWF DQVSLMPSDT YKGHGFRKEL 240 LYMLLELKPQ FLRFPGGCFV EGDWLRNAFR WRETIGPWEQ RPGHFGDVWN YWTDDGLGYY 300 EFLQLSEDLG AAPIWVFNVG ISHHDEVDTT IIEPFVKDVL DSLEFARGRA ESTWGSVRAA 360 MGHPERFPLK YVAIGNEDCD KGFYRGNYLK FYDAIRKAYP DIQMISNCDG SSRPLDHPAD 420 LYDFHVYTSA ANLFIMKNKF DRTSRIGSKV FVSEYAVNEQ RDAGKGSLLA SLAEAAFLTG 480 LEKNSDLVQM ASYAPLFVND NDRTWNPDAI VFNSWQQYGT PSYWMQTYFR ESSGSVIHPI 540 TIGSSYSDSL AASAITWKDT HDIFLRIKIV NFGPNAVNLA ISSRGLQAGV NTAKSTVTVL 600 TSGNLLDENS FAEPNKVVPV KSELPDASEE MEAALSPYSF TSFDLALDQY SKLVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 7.0e-5 | 483 | 639 | 175 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 2.0e-27 | 235 | 377 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 7.0e-35 | 479 | 639 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 5.0e-48 | 453 | 639 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67598.1 | 0 | 22 | 657 | 23 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| GenBank | EEC67602.1 | 0 | 30 | 657 | 1 | 628 | hypothetical protein OsI_34972 [Oryza sativa Indica Group] |
| RefSeq | NP_001065660.1 | 0 | 22 | 657 | 23 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001065664.1 | 0 | 1 | 657 | 1 | 657 | Os11g0132600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442705.1 | 0 | 11 | 657 | 12 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 7e-22 | 235 | 648 | 68 | 504 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3ug5_E | 7e-22 | 235 | 648 | 68 | 504 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3ug5_D | 7e-22 | 235 | 648 | 68 | 504 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3ug5_C | 7e-22 | 235 | 648 | 68 | 504 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3ug5_B | 7e-22 | 235 | 648 | 68 | 504 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
