Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05270.1-v1.0-hybrid |
Family | GH47 |
Protein Properties | Length: 536 Molecular Weight: 60610.5 Isoelectric Point: 5.7344 |
Chromosome | Chromosome/Scaffold: 6 Start: 28690764 End: 28696405 |
Description | alpha-mannosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 98 | 305 | 0 |
AMIHAWSSYEKYAWGQDELQPQTKNGVNSFGGLGATLVDSLDTLYIMGLHEQFQRAREWVATSLDFDKDYEASVFETTIRVVGGLLSAYDLSEDKLFLDK AREIADRLLPAWDTPSGIPYNIINLAHGRAHNPSWTGGESILADSGTEQVEFIALSQRTGDPKYQQKAENVIVQLNKTFPDDGLLPIYIDPDKGTAGYAT ITFGAMGD | |||
GH47 | 306 | 507 | 0 |
RDMWEKSMTGLSSLIRRTTPSSFAYICEKNGNTLTNKMDELACFAPGMLALGSSGYGPDESKKFLSLAEDLAWTCYNFYQSTPTKLAGENYFFHAGQDLS VGTSWNILRPETIESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRIDSGYVGLKDVNTGVKDNMMQSFFLAETLKYLYLLFSPTSVISLDDWVFNTEAHPL KI |
Full Sequence |
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Protein Sequence Length: 536 Download |
MARTRSSSTR LRYCNPAYYL KRPKRLALLF IAFVCATLIV WDRQSLVREH EEELSKLNEE 60 LNHLKSLLED LPNGRASEKE VVPDDPIDVQ RREKVKEAMI HAWSSYEKYA WGQDELQPQT 120 KNGVNSFGGL GATLVDSLDT LYIMGLHEQF QRAREWVATS LDFDKDYEAS VFETTIRVVG 180 GLLSAYDLSE DKLFLDKARE IADRLLPAWD TPSGIPYNII NLAHGRAHNP SWTGGESILA 240 DSGTEQVEFI ALSQRTGDPK YQQKAENVIV QLNKTFPDDG LLPIYIDPDK GTAGYATITF 300 GAMGDRDMWE KSMTGLSSLI RRTTPSSFAY ICEKNGNTLT NKMDELACFA PGMLALGSSG 360 YGPDESKKFL SLAEDLAWTC YNFYQSTPTK LAGENYFFHA GQDLSVGTSW NILRPETIES 420 LFYLWRLTGN KTYQEWGWNI FQAFEKNSRI DSGYVGLKDV NTGVKDNMMQ SFFLAETLKY 480 LYLLFSPTSV ISLDDWVFNT EAHPLKIVTR HDGKSSGVTR DRPKIRLRGR KEGRP* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01532 | Glyco_hydro_47 | 0 | 98 | 507 | 449 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
PTZ00470 | PTZ00470 | 0 | 69 | 507 | 470 | + glycoside hydrolase family 47 protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 83 | 517 | 12 | 475 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 86 | 509 | 4 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 86 | 509 | 4 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 86 | 509 | 4 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 70 | 509 | 59 | 536 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |