Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna09481.1-v1.0-hybrid |
Family | GH47 |
Protein Properties | Length: 516 Molecular Weight: 58623.7 Isoelectric Point: 6.1049 |
Chromosome | Chromosome/Scaffold: 5 Start: 10583057 End: 10586997 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 43 | 302 | 0 |
MFYHAYDNYMIHAFPHDELKPLSKSFTDSLSELGNLKLEHLPQDYNGSALTLIESLSSLVIMGNNTEFQSAVVWLSENLTFDVDARVNLFECNIRVLGGL VSAHLLATDSTHRLGQGVYKNQLLTLAEDLGNRFLPAFNTPTGLPYAWINLKYGVVENETTETSTSGCGSLILEMGALSRLTGDPKYESAALRALRKLWS MRSSLNLLGTTLDVSTGEWIEYSSGIGAGVDSFYEYLYKAHILFGKEEFWRMFHLAYIAV | |||
GH47 | 302 | 439 | 0 |
VLVGDIAAANSSHREFFYVWNKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIVNSLNLHTKVEGGFASIRDVTTMELED HQHSFFLAETCKYLYLLFDDSFLAEQNYVFTTEGHPLP |
Full Sequence |
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Protein Sequence Length: 516 Download |
MLPRKSVTWV LLLLLIFFNL STSHSDPRWA AKKRRLRNKV RTMFYHAYDN YMIHAFPHDE 60 LKPLSKSFTD SLSELGNLKL EHLPQDYNGS ALTLIESLSS LVIMGNNTEF QSAVVWLSEN 120 LTFDVDARVN LFECNIRVLG GLVSAHLLAT DSTHRLGQGV YKNQLLTLAE DLGNRFLPAF 180 NTPTGLPYAW INLKYGVVEN ETTETSTSGC GSLILEMGAL SRLTGDPKYE SAALRALRKL 240 WSMRSSLNLL GTTLDVSTGE WIEYSSGIGA GVDSFYEYLY KAHILFGKEE FWRMFHLAYI 300 AVLVGDIAAA NSSHREFFYV WNKFGVLPER YLLDHQMLHP TEKYYPLRPE FAESTFYLYQ 360 ATKDPWYIEV GESIVNSLNL HTKVEGGFAS IRDVTTMELE DHQHSFFLAE TCKYLYLLFD 420 DSFLAEQNYV FTTEGHPLPT DKEVRRTSAM SKQVCPSTSL NSWECAGQKI ESACHILDFH 480 GDHRCLTDEE CGVDSTNCRR RSCSMAGYCG LWLFI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 2.0e-77 | 37 | 439 | 475 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-144 | 43 | 439 | 470 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 31 | 446 | 15 | 471 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 34 | 422 | 11 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 34 | 422 | 11 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 34 | 422 | 11 | 416 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 34 | 422 | 11 | 416 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |