Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.256110.1 |
Family | GT14 |
Protein Properties | Length: 440 Molecular Weight: 48536.4 Isoelectric Point: 7.969 |
Chromosome | Chromosome/Scaffold: 02229 Start: 3793248 End: 3795638 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 92 | 348 | 0 |
IAYLISGSNGDSDRILRLLFATYHPRNHYLLHLDLSAPQSERDSLALAVESDPIFRAAQNVDVIGRADFVYLKGSSAISSTLHGASLLLHLSPNWDWFIR LTADDYPLVTQDDLLHILSFLPKDMNFVTHSSYIGWRETKKLKPIIVDPGLYLSEKTAMFYATQKRELPNAFQLFTGSSLSILSRNVVEFCILGTDNLPR TLLMYFSNTQSGHLNYFPTVLCNSHQFNKTVFNDNLLFAIYDKPPKEEPHVLGSSDF |
Full Sequence |
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Protein Sequence Length: 440 Download |
MQSSPAPPSL APSPAALALK DSKTTLSIIF ATALFSLIFF LSISSSANLS PFSSPALPRR 60 PKPNPFLFPT RQAHRTVFHS SNASSDPTPP SIAYLISGSN GDSDRILRLL FATYHPRNHY 120 LLHLDLSAPQ SERDSLALAV ESDPIFRAAQ NVDVIGRADF VYLKGSSAIS STLHGASLLL 180 HLSPNWDWFI RLTADDYPLV TQDDLLHILS FLPKDMNFVT HSSYIGWRET KKLKPIIVDP 240 GLYLSEKTAM FYATQKRELP NAFQLFTGSS LSILSRNVVE FCILGTDNLP RTLLMYFSNT 300 QSGHLNYFPT VLCNSHQFNK TVFNDNLLFA IYDKPPKEEP HVLGSSDFDL MIDSGAAFAT 360 RFKLNDPVLN RIDNEILNRG PGHTVPGGWC LGEAGNDTCL VWGNADVIRP GLGARRLEKR 420 IVGLLSNGTF RSNRCVVVE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 8.0e-59 | 92 | 352 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-132 | 64 | 436 | 380 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS99698.1 | 0 | 23 | 436 | 9 | 415 | At3g24040 [Arabidopsis thaliana] |
EMBL | CAN80510.1 | 0 | 53 | 437 | 46 | 458 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282998.1 | 0 | 53 | 437 | 46 | 431 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 26 | 437 | 24 | 427 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 13 | 437 | 20 | 437 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000004 | 108 | 379 | 101 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000004 | 108 | 379 | 101 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000004 | 108 | 379 | 101 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000004 | 108 | 379 | 101 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000005 | 108 | 379 | 101 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |