Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna31025.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 422 Molecular Weight: 47837.7 Isoelectric Point: 8.7556 |
Chromosome | Chromosome/Scaffold: 1 Start: 2180443 End: 2183066 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 74 | 330 | 0 |
LAYLISGSMGDCESLKRTLKALYHPRNQYAVHLDLEASPEERLELVRFVRSEPMFEKLGNVRVVVRANLVTYRGPTMVSNTLHAAAILLKEGGKWDWFIN LSASDYPLVTQDDMLHVLSSIPRTLNFIEHTSDIGWKEYQRAKPIIIDPGLYSVQKSDVFWAPEKRSVPSAYKLFTGSAWMMLSRPFVEYMVWGWDNLPR IVLMYYANFLSSPEGYFHTVICNAEEFRNTTVSHDLHFISWDNPPKQHPHFLTNDDY |
Full Sequence |
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Protein Sequence Length: 422 Download |
METSKTQKRK KWFLPLVLSL LLSTFLIFIT VFTSSSSSAS RLYKTHVRNN VPHFVESNSK 60 LKVSDTNKDP VPRLAYLISG SMGDCESLKR TLKALYHPRN QYAVHLDLEA SPEERLELVR 120 FVRSEPMFEK LGNVRVVVRA NLVTYRGPTM VSNTLHAAAI LLKEGGKWDW FINLSASDYP 180 LVTQDDMLHV LSSIPRTLNF IEHTSDIGWK EYQRAKPIII DPGLYSVQKS DVFWAPEKRS 240 VPSAYKLFTG SAWMMLSRPF VEYMVWGWDN LPRIVLMYYA NFLSSPEGYF HTVICNAEEF 300 RNTTVSHDLH FISWDNPPKQ HPHFLTNDDY ELMVDSNAPF ARKFGRNESV LSKIDSELLG 360 CNADGYVPGG WFGTGTNGNA TVPDYTIKNV TTLRPGPGAE RLKRLITGLI SAEDFHAKQC 420 A* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam02485 | Branch | 2.0e-82 | 74 | 334 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. |
PLN03183 | PLN03183 | 0 | 69 | 420 | 352 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000006 | 86 | 294 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000006 | 86 | 294 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000006 | 86 | 294 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000006 | 86 | 294 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000002 | 86 | 294 | 97 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |