| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020100 |
| Family | GH17 |
| Protein Properties | Length: 344 Molecular Weight: 37417.1 Isoelectric Point: 7.0706 |
| Chromosome | Chromosome/Scaffold: 02 Start: 5031140 End: 5032171 |
| Description | beta-1,3-glucanase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 32 | 342 | 0 |
| VGLNYGLLGDNLPPPSNVINLYKSIGITKVRIFDPNTEVLNALRGHRDIKVTVGVRDQDLAPLAASEDAVKAWFATNIEPYLADVNIAFITVGNEVIPGP IGPHVLPVMTSLTNLVKSRNLPISISTVVSMANLGQSYPPSAGMFTSQAREQLTPVLKFLSQTSTPILVNIYPYFPYATDPVNIHLDYAISKSKAIVVHD GPLGYSNMFDAMFDAFLWAMEKEGVKGLPMVVSETGWPSAGNGDMTTPLIAATYNGNFVKHVDSGKGTPKRPNSRVDGFLFATFNENQKPPGTEQNFGLY NPVDMKPIYKL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 344 Download |
| MNYSPKTVFL FFLSCIVLIF NYGLVTTAAS NVGLNYGLLG DNLPPPSNVI NLYKSIGITK 60 VRIFDPNTEV LNALRGHRDI KVTVGVRDQD LAPLAASEDA VKAWFATNIE PYLADVNIAF 120 ITVGNEVIPG PIGPHVLPVM TSLTNLVKSR NLPISISTVV SMANLGQSYP PSAGMFTSQA 180 REQLTPVLKF LSQTSTPILV NIYPYFPYAT DPVNIHLDYA ISKSKAIVVH DGPLGYSNMF 240 DAMFDAFLWA MEKEGVKGLP MVVSETGWPS AGNGDMTTPL IAATYNGNFV KHVDSGKGTP 300 KRPNSRVDGF LFATFNENQK PPGTEQNFGL YNPVDMKPIY KLF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.005 | 260 | 332 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-101 | 32 | 342 | 314 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62473.1 | 0 | 1 | 343 | 1 | 345 | beta-1,3-glucanase bg4 [Arabidopsis thaliana] |
| RefSeq | NP_174592.1 | 0 | 1 | 343 | 1 | 335 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197533.1 | 0 | 1 | 343 | 1 | 345 | BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197534.1 | 0 | 1 | 343 | 1 | 354 | BG5 (beta-1,3-glucanase 5); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_197539.1 | 0 | 1 | 343 | 1 | 344 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 32 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 32 | 333 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 32 | 333 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 32 | 333 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 32 | 333 | 2 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
