Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G257700.1 |
Family | GH17 |
Protein Properties | Length: 338 Molecular Weight: 36804.7 Isoelectric Point: 4.1394 |
Chromosome | Chromosome/Scaffold: 04 Start: 59378363 End: 59379721 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 336 | 0 |
IGVCYGLNGDNLPPPNEVINLYKRCQIDNIRIYQPYPEVLEALRGSGISVTIGPRNEDIASFATSQDAANDWVNTNIVPYADDIVFRWITIGNEVIPGPL GSNVPAAMNSIRNALDSAGITLAKVTTVLPGTALAASYPPSAGAFGSDITETMTGIAAILAQEDTPLLINVYPYFAYASDPSHISAQYAMFTSTAPVVID GSFQYFNLFDAMVDAFNAALEKINFGNVKVAVAETGWSTVGNEPYTSVANAQTYNRNLLNHVTQNGTPRRPDYIMPTFFFEMFNEDLKGNVVEQNFGFFY PSMQPVYPF |
Full Sequence |
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Protein Sequence Length: 338 Download |
MVPKFAQLFV STLLLLTPLL SIADGRDIGV CYGLNGDNLP PPNEVINLYK RCQIDNIRIY 60 QPYPEVLEAL RGSGISVTIG PRNEDIASFA TSQDAANDWV NTNIVPYADD IVFRWITIGN 120 EVIPGPLGSN VPAAMNSIRN ALDSAGITLA KVTTVLPGTA LAASYPPSAG AFGSDITETM 180 TGIAAILAQE DTPLLINVYP YFAYASDPSH ISAQYAMFTS TAPVVIDGSF QYFNLFDAMV 240 DAFNAALEKI NFGNVKVAVA ETGWSTVGNE PYTSVANAQT YNRNLLNHVT QNGTPRRPDY 300 IMPTFFFEMF NEDLKGNVVE QNFGFFYPSM QPVYPFW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 56 | 327 | 284 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-106 | 28 | 336 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 4 | 336 | 5 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
DDBJ | BAA21110.1 | 0 | 5 | 270 | 1 | 266 | endo-1,3-beta-glucanase [Gossypium hirsutum] |
RefSeq | NP_177901.1 | 0 | 8 | 337 | 2 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 28 | 337 | 7 | 317 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 29 | 337 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 334 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 334 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 334 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 334 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 334 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |