| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 476269 |
| Family | GH9 |
| Protein Properties | Length: 485 Molecular Weight: 53365.1 Isoelectric Point: 8.6831 |
| Chromosome | Chromosome/Scaffold: 2 Start: 14910440 End: 14912507 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 476 | 0 |
| NYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSALEYGKRMGPELENARVNIRWATDYLLK CARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKNVMQFAIQYRGAYSDSLSSSVC PFYCSYSGYKDELMWGASWLLRATNDPYYANFIKSLGGGDQPDIFSWDNKYAGAYVLLSRRALLNKDSNFEQYKQAAENFICKILPDSPSSSTQYTQGGL MYKLPQSNLQYVTSITFLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFGSNFPKRIHHRASSLPSHALHSHSLGCNGG FQSFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MTSPFFFVFL FSSLLIGNVD ANPNYKEALS KSLLFFQGQR SGPLPRGQQL SWRASSGLSD 60 GSAAHVDLTG GYYDAGDNVK FNFPMAFTTT MLSWSALEYG KRMGPELENA RVNIRWATDY 120 LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSPSNPGSDV AAETAAALAA 180 ASMVFRKVDS KYSRLLLATA KNVMQFAIQY RGAYSDSLSS SVCPFYCSYS GYKDELMWGA 240 SWLLRATNDP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA 300 ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK STKHTFNCGN 360 SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFGSNFPKR IHHRASSLPS HALHSHSLGC 420 NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA 480 GRSA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 0 | 16 | 483 | 468 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 21 | 479 | 463 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 19 | 480 | 466 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 476 | 464 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 20 | 480 | 468 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63253.1 | 0 | 1 | 483 | 1 | 483 | putative beta-glucanase [Arabidopsis thaliana] |
| GenBank | AAT75042.1 | 0 | 17 | 480 | 19 | 483 | Cel9B [Populus tremula x Populus tremuloides] |
| RefSeq | NP_173701.1 | 0 | 1 | 483 | 1 | 483 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 483 | 1 | 483 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002329161.1 | 0 | 17 | 480 | 19 | 478 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 480 | 4 | 430 | B Chain B, Crystal Structure Of T-Cell Receptor V Beta Domain Variant Complexed With Superantigen Sec3 Mutant |
| PDB | 1ksc_A | 0 | 24 | 480 | 4 | 430 | B Chain B, Crystal Structure Of T-Cell Receptor V Beta Domain Variant Complexed With Superantigen Sec3 Mutant |
| PDB | 1ks8_A | 0 | 24 | 480 | 4 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
