| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra007982 |
| Family | GH9 |
| Protein Properties | Length: 485 Molecular Weight: 53552.2 Isoelectric Point: 5.5826 |
| Chromosome | Chromosome/Scaffold: 02 Start: 12268170 End: 12270142 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 476 | 0 |
| NYVEALSKSLLFFQGQRSGPLPTDQQLSWRASSGLSDGSSANVDLTGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGAQMGPHLQNVSRVNIRWATDYLL KCATATPGKLYVGVGDPNADHKCWERPEDMDTPRTVYYVSSSNPGSDVAAETAAALAAASMVFREVDSEYSLLLLAAAKNVMQFAIQYRGNYSDSLSSSV CPFYCSYSGYKDELMWGAAWLLKATDDSNYKNFIESLGGGDHPDIFNWDSKYAGAYVLLSQRALVNKDINYELYKQEAESFICKILPNSPSTHYTPGGLM YKLPQSNLQHVTAVTFLLTTYAKYMKATQHIFNCGNSVIVNPDTLISLSKQQVDYILGENPIKMSYMVGFGSSFPMRIHHRASSLPSQVLLSKPFNCTEG FQFYHTQNPNPNILTGAIVGGPDKNDEYPDKRDDYIHSEPATYINAPFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MTSLFFLVFL FSSSLTLNVD ANPNYVEALS KSLLFFQGQR SGPLPTDQQL SWRASSGLSD 60 GSSANVDLTG GYYDAGDNIK FNFPMAFTTT MLSWSTLEYG AQMGPHLQNV SRVNIRWATD 120 YLLKCATATP GKLYVGVGDP NADHKCWERP EDMDTPRTVY YVSSSNPGSD VAAETAAALA 180 AASMVFREVD SEYSLLLLAA AKNVMQFAIQ YRGNYSDSLS SSVCPFYCSY SGYKDELMWG 240 AAWLLKATDD SNYKNFIESL GGGDHPDIFN WDSKYAGAYV LLSQRALVNK DINYELYKQE 300 AESFICKILP NSPSTHYTPG GLMYKLPQSN LQHVTAVTFL LTTYAKYMKA TQHIFNCGNS 360 VIVNPDTLIS LSKQQVDYIL GENPIKMSYM VGFGSSFPMR IHHRASSLPS QVLLSKPFNC 420 TEGFQFYHTQ NPNPNILTGA IVGGPDKNDE YPDKRDDYIH SEPATYINAP FVGPLAYFAS 480 RGSA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 0 | 18 | 480 | 465 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 21 | 479 | 465 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 19 | 480 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 476 | 465 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 20 | 480 | 469 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB65156.1 | 0 | 18 | 479 | 21 | 483 | basic cellulase [Citrus sinensis] |
| GenBank | AAM63253.1 | 0 | 1 | 480 | 1 | 480 | putative beta-glucanase [Arabidopsis thaliana] |
| GenBank | AAT75042.1 | 0 | 19 | 480 | 21 | 483 | Cel9B [Populus tremula x Populus tremuloides] |
| RefSeq | NP_173701.1 | 0 | 1 | 483 | 1 | 483 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 480 | 1 | 480 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 482 | 4 | 432 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 0 | 24 | 482 | 4 | 432 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 0 | 24 | 482 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
