| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 912356 |
| Family | GH9 |
| Protein Properties | Length: 498 Molecular Weight: 55312.9 Isoelectric Point: 5.166 |
| Chromosome | Chromosome/Scaffold: 1 Start: 11124104 End: 11125655 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 29 | 488 | 0 |
| DYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNTDLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEFGELMPSSELRNSLVALRWSSNYLL KSVSQLPNRIFVQVGDPIADHNCWERPEDMDTPRTAYVVNAPNPASEVAGETTAALSAASIAFRSSDAGYSQTLLQNAVKTFHFADMYRGAYSSNDDIKN DVCPFYCDFNGFQDELLWGAAWLRKATGDESYLNYIESNREPFGANDNVDEFGWDNKVGGLNVLVSKEVIEGNMYNLEAYKASAESFMCSLVPQSSGPHV EYTPAGLLYKPGGSQLQHATTISFLLLVYAQYLSRSSLSLNCGTLTIPPDHLRRLAKKQVNYILGDNPMGLSYMVGYGERYPKRIHHRGSSLPSIKDHPE AIRCKDGSVYFNSTEPNPNVLIGAVVGGPGEDDKYDDDRSDFRKSEPTTYINAPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MKLHLYPLSL VFSFFLLLLR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN 60 SGLSDGWTHN TDLTGGYYDA GDNVKFNFPM AFTTTMLAWS VIEFGELMPS SELRNSLVAL 120 RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYVVNAP NPASEVAGET 180 TAALSAASIA FRSSDAGYSQ TLLQNAVKTF HFADMYRGAY SSNDDIKNDV CPFYCDFNGF 240 QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG 300 NMYNLEAYKA SAESFMCSLV PQSSGPHVEY TPAGLLYKPG GSQLQHATTI SFLLLVYAQY 360 LSRSSLSLNC GTLTIPPDHL RRLAKKQVNY ILGDNPMGLS YMVGYGERYP KRIHHRGSSL 420 PSIKDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DKYDDDRSDF RKSEPTTYIN 480 APFVGVLAYF AANPGSS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03009 | PLN03009 | 0 | 2 | 497 | 496 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 21 | 494 | 474 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 28 | 495 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 29 | 488 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 29 | 488 | 463 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54548.1 | 0 | 8 | 497 | 8 | 496 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| EMBL | CAB38821.1 | 0 | 23 | 497 | 1 | 475 | putative endo-1, 4-beta-glucanase [Arabidopsis thaliana] |
| EMBL | CAN70805.1 | 0 | 21 | 497 | 20 | 495 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_568050.1 | 0 | 1 | 497 | 1 | 497 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002305460.1 | 0 | 23 | 497 | 1 | 474 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 28 | 492 | 3 | 430 | A Chain A, Peanut Peroxidase |
| PDB | 1ksc_A | 0 | 28 | 492 | 3 | 430 | A Chain A, Peanut Peroxidase |
| PDB | 1ks8_A | 0 | 28 | 492 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 29 | 497 | 5 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 29 | 497 | 5 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
