Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G254000.2 |
Family | GH9 |
Protein Properties | Length: 533 Molecular Weight: 59072 Isoelectric Point: 9.2852 |
Chromosome | Chromosome/Scaffold: 08 Start: 53725636 End: 53729546 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 27 | 488 | 0 |
DYNQALSKSILFFEAQRSGYLPHNQRITWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQMVANGELGHAMEAVKWGTDYF IKAHPQPYVLYGEVGDGNSDHYCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSRELLRHAYQLFEFADKYRGKYDSSITVAQ KYYRSISGYNDELLWAAAWLYQASNNKYYLNYLAKNGDSMGGTGWAMTEFGWDVKYAGVQTLVAKFLMQGEAGHHAPVFEKYRQKAEYFMCSLIGKGSRN IQKTPGGLIYRQRWNNMQFVTSASFLATVYSDYLTSYRGSLKCAAGNVAPSELLSFAKSQVDYLLGDNPRATSYMVGYGNNYPRQVHHRGSSIVSIKVNP KFVACRQGYATWYTRKASDPNVLTGALVGGPDAYDNFADERDNYEQTEPATYNNAPLLGILA |
Full Sequence |
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Protein Sequence Length: 533 Download |
MGKLMRLISM APLFLLLCLP FAFGGHDYNQ ALSKSILFFE AQRSGYLPHN QRITWRANSG 60 LNDGKASGVD LVGGYYDAGD NVKFGLPMAF TITMMSWSII EYGKQMVANG ELGHAMEAVK 120 WGTDYFIKAH PQPYVLYGEV GDGNSDHYCW QRPEDMTTDR RAYKIDPSNP GSDLAGETAA 180 AMAAASIVFR RSNPAYSREL LRHAYQLFEF ADKYRGKYDS SITVAQKYYR SISGYNDELL 240 WAAAWLYQAS NNKYYLNYLA KNGDSMGGTG WAMTEFGWDV KYAGVQTLVA KFLMQGEAGH 300 HAPVFEKYRQ KAEYFMCSLI GKGSRNIQKT PGGLIYRQRW NNMQFVTSAS FLATVYSDYL 360 TSYRGSLKCA AGNVAPSELL SFAKSQVDYL LGDNPRATSY MVGYGNNYPR QVHHRGSSIV 420 SIKVNPKFVA CRQGYATWYT RKASDPNVLT GALVGGPDAY DNFADERDNY EQTEPATYNN 480 APLLGILARL AGGHGGYNQL LPVVAPAPNP VIAKLKPAPK PKRTPTPGIL IF* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 0 | 1 | 501 | 504 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 24 | 490 | 469 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 25 | 490 | 467 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 27 | 491 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN04496.2 | 0 | 1 | 520 | 1 | 515 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
GenBank | ACT54546.1 | 0 | 16 | 527 | 11 | 522 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | XP_002270880.1 | 0 | 1 | 527 | 1 | 530 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 527 | 1 | 523 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 527 | 1 | 523 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 490 | 3 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ksc_A | 0 | 26 | 490 | 3 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ks8_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 20 | 490 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 27 | 496 | 5 | 446 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |