| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016143 |
| Family | GH9 |
| Protein Properties | Length: 485 Molecular Weight: 53576.4 Isoelectric Point: 8.9338 |
| Chromosome | Chromosome/Scaffold: 07 Start: 19213508 End: 19215258 |
| Description | cellulase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 24 | 476 | 0 |
| NYREALSKSLLFFQGQRSGRLPRDQQVSWRASSGLSDGSTAHVDLTGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGKRMGPELKNARENIRWGTDYLLK CARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSSSNPGSDVAAETAAALAAASMVFRKADPKYSRLLLATAKNVMQFAIQYRGAYSDSLSSSVC PFYCSYSGYKDELMWGAAWLLRATNNPYYENLIKSLGSGDQPDIFSWDNKYAGAYVLLSRRALLNKDSNFEQYKQSAENFMCKILPNSPSSSTQYTQGGL MYKLPQSNLQYVTAITFLLTTYAKYMKATRHTFDCGSSVIVPNALLSVSKQQVDYILGENPIKMSYMVGFGQSFPKRIHHRASSLPSHALLSKPLGCNGG FQSFYSQNHNPNVLTGAIVGGPNQSDGYPDQRDDYSHSEPATYINAAFVGPLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MTSLFFLVLL SSPILTRNVE ANPNYREALS KSLLFFQGQR SGRLPRDQQV SWRASSGLSD 60 GSTAHVDLTG GYYDAGDNIK FNFPMAFTTT MLSWSTLEYG KRMGPELKNA RENIRWGTDY 120 LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSSSNPGSDV AAETAAALAA 180 ASMVFRKADP KYSRLLLATA KNVMQFAIQY RGAYSDSLSS SVCPFYCSYS GYKDELMWGA 240 AWLLRATNNP YYENLIKSLG SGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQSA 300 ENFMCKILPN SPSSSTQYTQ GGLMYKLPQS NLQYVTAITF LLTTYAKYMK ATRHTFDCGS 360 SVIVPNALLS VSKQQVDYIL GENPIKMSYM VGFGQSFPKR IHHRASSLPS HALLSKPLGC 420 NGGFQSFYSQ NHNPNVLTGA IVGGPNQSDG YPDQRDDYSH SEPATYINAA FVGPLAYFAS 480 GRSA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 0 | 1 | 483 | 483 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 21 | 479 | 463 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 2 | 480 | 483 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 476 | 464 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 1 | 480 | 487 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63253.1 | 0 | 1 | 483 | 1 | 483 | putative beta-glucanase [Arabidopsis thaliana] |
| GenBank | AAT75042.1 | 0 | 19 | 480 | 21 | 483 | Cel9B [Populus tremula x Populus tremuloides] |
| RefSeq | NP_173701.1 | 0 | 1 | 483 | 1 | 483 | CEL5 (CELLULASE 5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_177294.1 | 0 | 1 | 483 | 1 | 483 | ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002329161.1 | 0 | 19 | 480 | 21 | 478 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 476 | 4 | 426 | A Chain A, Peanut Peroxidase |
| PDB | 1ksc_A | 0 | 24 | 476 | 4 | 426 | A Chain A, Peanut Peroxidase |
| PDB | 1ks8_A | 0 | 24 | 476 | 4 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 476 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
