Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si019460m |
Family | GH9 |
Protein Properties | Length: 496 Molecular Weight: 54272.6 Isoelectric Point: 7.5774 |
Chromosome | Chromosome/Scaffold: 1 Start: 39672073 End: 39674778 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 36 | 482 | 0 |
DYKDALTKTIIFLEAQRSGKLPPNNRVKWRGDSGLEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTALAFKPELQSAKELDHVHEAIRWGTDYL LKCASRKKKLWVQVGDPNLDHQCWVRPENMKAPRTLYEIDEKTPGTEIAAETAAAFAASSMVFRHDKKYSRALLNKAKLLFLFAKSHQGSYDGECPFYCS YSGYNDELLWAATWLYLATKRQVYADFITHEAISSSVAEFSWDLKFPGAQVLLSEFNMTSGGGAQNFKTQADNFVCAVLPDTAFHQVFITPGGMIHLRDG ANTQYVTGTSFLFIVYSDLLLRTGQSVMCGNQAVKPERLREFARQQMDYLLGANPRGSSYVVGFGANSPTQPHHRGASTPVLPPGYDVNCGLSFGEWFAP DRPNPNELTGAIMGGPDKDDRFVDKRANSSYTEPCTYINSLAIGPLA |
Full Sequence |
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Protein Sequence Length: 496 Download |
MRALKHGTMR AHVALALAAL VLAGDALQPA LAGGFDYKDA LTKTIIFLEA QRSGKLPPNN 60 RVKWRGDSGL EDGKLANVDL TGGYYDAGDN VKYGLPLAFT VTTLAWTALA FKPELQSAKE 120 LDHVHEAIRW GTDYLLKCAS RKKKLWVQVG DPNLDHQCWV RPENMKAPRT LYEIDEKTPG 180 TEIAAETAAA FAASSMVFRH DKKYSRALLN KAKLLFLFAK SHQGSYDGEC PFYCSYSGYN 240 DELLWAATWL YLATKRQVYA DFITHEAISS SVAEFSWDLK FPGAQVLLSE FNMTSGGGAQ 300 NFKTQADNFV CAVLPDTAFH QVFITPGGMI HLRDGANTQY VTGTSFLFIV YSDLLLRTGQ 360 SVMCGNQAVK PERLREFARQ QMDYLLGANP RGSSYVVGFG ANSPTQPHHR GASTPVLPPG 420 YDVNCGLSFG EWFAPDRPNP NELTGAIMGG PDKDDRFVDK RANSSYTEPC TYINSLAIGP 480 LAALAARGAQ LVATH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 5.0e-138 | 28 | 475 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-144 | 36 | 475 | 455 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 2.0e-145 | 36 | 475 | 453 | + endoglucanase | ||
PLN02613 | PLN02613 | 1.0e-160 | 36 | 475 | 450 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 30 | 475 | 447 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86783.1 | 0 | 1 | 495 | 1 | 497 | unknown [Zea mays] |
GenBank | EAZ07843.1 | 0 | 23 | 495 | 26 | 501 | hypothetical protein OsI_30101 [Oryza sativa Indica Group] |
RefSeq | NP_001048297.1 | 0 | 23 | 495 | 26 | 501 | Os02g0778600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151937.1 | 0 | 1 | 495 | 1 | 497 | endoglucanase [Zea mays] |
RefSeq | XP_002452914.1 | 0 | 1 | 495 | 1 | 497 | hypothetical protein SORBIDRAFT_04g034920 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 35 | 488 | 3 | 432 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ksc_A | 0 | 35 | 488 | 3 | 432 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1ks8_A | 0 | 35 | 488 | 3 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 28 | 484 | 17 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 35 | 484 | 4 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |