Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.010G062700.1 |
Family | GH17 |
Protein Properties | Length: 391 Molecular Weight: 42730.9 Isoelectric Point: 6.6648 |
Chromosome | Chromosome/Scaffold: 10 Start: 7800045 End: 7804393 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 30 | 347 | 0 |
GINYGRIANNLPSPDEVVTLLKAAKIRNVRIYDADQSVLKAFSGTGLEIVVGLPNGNLRDVSADGDHAMSWVQDNVLAYLPDTCIRGIAIGNEVLGGSDQ FSGFLLGAVKNVYNAVNKLKLSDVVQITTAHSQAVFANSFPPSSCVFRDNVVQYMKPLLEFFSQIGSPFCLNAYPFLAYMYDPEHIDINYALFLPTVGAN DPKTKLHYDNLLDAQIDAAYAALEDAGFKKMEVIVTETGWASHGDENESAATVDNARTYNYNLRKRLAKMKGTPLRPKNVVKAYVFALFNENLKPGPTSE RNFGLFKPDGSISYDIGF |
Full Sequence |
---|
Protein Sequence Length: 391 Download |
MKILGVSLFF FIFLAPFAFV TVQAFTGTYG INYGRIANNL PSPDEVVTLL KAAKIRNVRI 60 YDADQSVLKA FSGTGLEIVV GLPNGNLRDV SADGDHAMSW VQDNVLAYLP DTCIRGIAIG 120 NEVLGGSDQF SGFLLGAVKN VYNAVNKLKL SDVVQITTAH SQAVFANSFP PSSCVFRDNV 180 VQYMKPLLEF FSQIGSPFCL NAYPFLAYMY DPEHIDINYA LFLPTVGAND PKTKLHYDNL 240 LDAQIDAAYA ALEDAGFKKM EVIVTETGWA SHGDENESAA TVDNARTYNY NLRKRLAKMK 300 GTPLRPKNVV KAYVFALFNE NLKPGPTSER NFGLFKPDGS ISYDIGFPGL KSSSADSLLL 360 SLKDNRGCGW CGCYSIILTM ATAFLLVFSR * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 27 | 338 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-105 | 30 | 347 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 23 | 363 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 24 | 387 | 29 | 387 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 10 | 390 | 14 | 393 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 21 | 355 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 17 | 390 | 5 | 377 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_C | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_B | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_A | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3em5_D | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |