Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G129500.4 |
Family | GH17 |
Protein Properties | Length: 379 Molecular Weight: 41481.6 Isoelectric Point: 6.6812 |
Chromosome | Chromosome/Scaffold: 18 Start: 15112704 End: 15115715 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 18 | 336 | 0 |
GINYGRIADNIPSPDEVATLLRAAKIKNVRIYDADHSVLKAFSGTGLQLVVGLPNGFVKEMSANASHAMAWVKENVQAFLPKTSVCGIAVGNEILGGGDY ELWEALLGAVKNIYNAVDKLGLADVVQISTAHSQAVFDNSYPPSSCIFRENVAQFMKPLLEFFSQIGSPFCLNAYPFLAYMSDPENIDINYALFQKTKGI YDMKTDLHYDNMLDAQIDATYAALEDAGFKKMEVIVTETGWASLGDTNEAAATVNNARTFNYNLRKRLAKKKGTPLRPKMVVKAYIFAIFNENLKSGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 379 Download |
MELRFYLLTA ETFTGTYGIN YGRIADNIPS PDEVATLLRA AKIKNVRIYD ADHSVLKAFS 60 GTGLQLVVGL PNGFVKEMSA NASHAMAWVK ENVQAFLPKT SVCGIAVGNE ILGGGDYELW 120 EALLGAVKNI YNAVDKLGLA DVVQISTAHS QAVFDNSYPP SSCIFRENVA QFMKPLLEFF 180 SQIGSPFCLN AYPFLAYMSD PENIDINYAL FQKTKGIYDM KTDLHYDNML DAQIDATYAA 240 LEDAGFKKME VIVTETGWAS LGDTNEAAAT VNNARTFNYN LRKRLAKKKG TPLRPKMVVK 300 AYIFAIFNEN LKSGPTSERN FGLFKPDGSI SYDIGFHGLS SAESSLLSLK AVQSQGLTKS 360 YILILTISAA ALILFLKQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.005 | 15 | 327 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-97 | 18 | 336 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67102.1 | 0 | 13 | 376 | 29 | 387 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAY25165.1 | 0 | 11 | 350 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | XP_002282272.1 | 0 | 8 | 377 | 24 | 393 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 9 | 344 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 1 | 378 | 1 | 378 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 18 | 336 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 18 | 336 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 18 | 336 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 18 | 336 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 18 | 336 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |