Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G085300.7 |
Family | GH17 |
Protein Properties | Length: 346 Molecular Weight: 38372.6 Isoelectric Point: 4.6967 |
Chromosome | Chromosome/Scaffold: 09 Start: 6204332 End: 6208440 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 160 | 2.09999e-41 |
VGINYGQIANNLPSPARVSYLLRSLNISRVKLYDADPNVLLAFANTNVEFIIGLGNEYLQNMTDPIKAQNWIQQRVQPYLTRTKITCITVGNEVYKTYDH QLWSNLLPAMQTVYNTLVNLGLDKQVTVTTS | |||
GH17 | 158 | 309 | 0 |
TTSPFLINAYPYFAYKDKPNEVPLNYVLFQPNQGTMDPSTNLKYDNMLFAQIDAVYSAIKAMGHTDIEVRISETGWPSRGDENEVGATPENAGLYNGNLL RRIEEKQGTPAKPNVPIDIYVFALFNENQKPGPTSERNYGLFYPDGTPVYNI |
Full Sequence |
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Protein Sequence Length: 346 Download |
MAASSSLLFT LLLVLLTFSD SSVQTLGLEV GINYGQIANN LPSPARVSYL LRSLNISRVK 60 LYDADPNVLL AFANTNVEFI IGLGNEYLQN MTDPIKAQNW IQQRVQPYLT RTKITCITVG 120 NEVYKTYDHQ LWSNLLPAMQ TVYNTLVNLG LDKQVTVTTS PFLINAYPYF AYKDKPNEVP 180 LNYVLFQPNQ GTMDPSTNLK YDNMLFAQID AVYSAIKAMG HTDIEVRISE TGWPSRGDEN 240 EVGATPENAG LYNGNLLRRI EEKQGTPAKP NVPIDIYVFA LFNENQKPGP TSERNYGLFY 300 PDGTPVYNIG VQGYLPELIY SSATTNNGFS ICSLLVLAIA YLISS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-8 | 57 | 302 | 258 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-80 | 30 | 309 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 21 | 345 | 18 | 379 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 23 | 340 | 30 | 390 | unknown [Glycine max] |
RefSeq | XP_002312820.1 | 0 | 21 | 333 | 18 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328249.1 | 0 | 22 | 333 | 21 | 370 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 27 | 327 | 10 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 30 | 309 | 3 | 312 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3ur8_A | 0 | 30 | 309 | 3 | 312 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3ur7_B | 0 | 30 | 309 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 30 | 309 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1ghs_B | 0 | 30 | 309 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |