| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.G01214.1 |
| Family | GH10 |
| Protein Properties | Length: 583 Molecular Weight: 65170.5 Isoelectric Point: 8.5814 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20544763 End: 20548610 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 232 | 491 | 0 |
| TKPGFPFGCGMNFHILESTDYQNWFASRFRYTTFTNAMKWYSTEAKQGQENYTTADAMVKFSQDNGISIRGHNVFWDDPKYQPDWVKTLSPEDLRKAAEK RINSVVSRYAGKLIAWDVVNENLHFSFFEDNLGKNASSIYYSTAYKLDPTPRMFLNEYNTIEYCGDEKVSPGNYKKRLKEIFSYPGNEDILAGIGVQGNF GRGQPNLAYMRSTLEILATTGVPIWLTELSVHPGVNQAQYLEEILREAFSHPAVEGIIMF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| MPLFLWLTFV LFYSGSAISG QITQAVFSDV QYDALATTQC LAEPGRTMYG GGVIVNPEFS 60 NGTAGWAVFG KGVIEGRVSH SKNRFMVARN RKRPMDSVSQ KVRLEKGKFY AFSAWIQVNE 120 GSETVSVVFR VGDGEFAPGG SIVAEQGCWS LLKGGVAANS SSTVDVLFKS KNTSKEIWVD 180 NVALQPFSKK QWRFHQDKSI EKVRKSRVRF QITYAKKRGL AVRGAKFLVK QTKPGFPFGC 240 GMNFHILEST DYQNWFASRF RYTTFTNAMK WYSTEAKQGQ ENYTTADAMV KFSQDNGISI 300 RGHNVFWDDP KYQPDWVKTL SPEDLRKAAE KRINSVVSRY AGKLIAWDVV NENLHFSFFE 360 DNLGKNASSI YYSTAYKLDP TPRMFLNEYN TIEYCGDEKV SPGNYKKRLK EIFSYPGNED 420 ILAGIGVQGN FGRGQPNLAY MRSTLEILAT TGVPIWLTEL SVHPGVNQAQ YLEEILREAF 480 SHPAVEGIIM FAGPAYAGFN VTALADISFN NTPAGDIVDN LIEEWKSPDF EAHTNDGGFF 540 STSLFHGEYE ITITNPATNC SSTSRFEVTR DSSGRTFHFQ IG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.0005 | 51 | 127 | 83 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 1.0e-34 | 267 | 481 | 226 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-50 | 236 | 521 | 311 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-72 | 269 | 516 | 271 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 5 | 581 | 10 | 579 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 32 | 581 | 25 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 37 | 573 | 2 | 536 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 35 | 581 | 3 | 548 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 39 | 581 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v0n_A | 1e-23 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 1e-23 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 1e-23 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0k_A | 1e-23 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1od8_A | 1e-23 | 233 | 463 | 11 | 240 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
