Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G231100.1 |
Family | GH10 |
Protein Properties | Length: 583 Molecular Weight: 64746.2 Isoelectric Point: 7.6518 |
Chromosome | Chromosome/Scaffold: 05 Start: 61359440 End: 61362726 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 230 | 491 | 0 |
QTKSGFPFGCGMNHYIVTDEAYRQWFASRFKVTSFTNEMKWYSTEKTRGVENYTVADAMVNFAEQNGISIRGHNVFWDNRVMQPKWVKELPPAELMKAAT RRLNSVVSRYAGRLIGWDVMNENLHFRFFEDKLGENASSMFYSMAYHLDPSMTLFMNEYNTIENSKDHTATACKYKEELEKILSFPGNAGLKAAIGLEGH FRDPKPNIAFMRSALDILGTMGLPIWLTEVDVGGGPDQAHNLEDILREGYSHPAVEGIIIFG |
Full Sequence |
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Protein Sequence Length: 583 Download |
MKIAEASVLL ATCILLFSGH GVFSFSYDYS ATMECLAAPK RAQYGGGMIG FNQRTNGSTL 60 SSELGVSNDG LHNTTLSLKT VKLEKGNLYT FSAWVQISNG SESETVAVAF KASNGELVHG 120 GETMAKQGCW SLLKGGIGAE FTGVVEILLM SKAMEIRVDN VSLQPFTAKE WRSHQDKSID 180 KVIRINRVVF IAVVYLSLVN LIQVRKKKVS FKVTYANGTA ADGALILILQ TKSGFPFGCG 240 MNHYIVTDEA YRQWFASRFK VTSFTNEMKW YSTEKTRGVE NYTVADAMVN FAEQNGISIR 300 GHNVFWDNRV MQPKWVKELP PAELMKAATR RLNSVVSRYA GRLIGWDVMN ENLHFRFFED 360 KLGENASSMF YSMAYHLDPS MTLFMNEYNT IENSKDHTAT ACKYKEELEK ILSFPGNAGL 420 KAAIGLEGHF RDPKPNIAFM RSALDILGTM GLPIWLTEVD VGGGPDQAHN LEDILREGYS 480 HPAVEGIIIF GGPIAAGFKC MTLANYDFEP TPVGEVVDKL INEWKSGRRQ VRTDSRGMSE 540 ILLFHGDYRV KVSHPLINSS MSINFKVTKE TENITVLLQF DA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-35 | 220 | 480 | 272 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 7.0e-43 | 232 | 484 | 271 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 1.0e-68 | 268 | 517 | 272 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 8 | 582 | 13 | 581 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 22 | 582 | 20 | 575 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313183.1 | 0 | 79 | 579 | 27 | 505 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 35 | 570 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 34 | 578 | 22 | 560 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1e0v_A | 3e-24 | 232 | 491 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0n_A | 3e-24 | 232 | 491 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0m_A | 3e-24 | 232 | 491 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0l_A | 3e-24 | 232 | 491 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0k_A | 3e-24 | 232 | 491 | 11 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |