Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G01773.1 |
Family | GH10 |
Protein Properties | Length: 550 Molecular Weight: 62007.8 Isoelectric Point: 5.0623 |
Chromosome | Chromosome/Scaffold: 7 Start: 32685057 End: 32688705 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 201 | 466 | 0 |
VKQVYKDFPFGSAIAKTILGNEAYQSWFVERFNAAVFENELKWYATEPYPGQINYTIADEMLEFIRANRIVTRGHNIFWEDPKYNPEWVQNLSGPQLESA VDTRIQSLMSRYREEFVHWDVSNEMLHFDFYEQRLGPNATLHFFQTAHESDPLATLFMNEFNVLETCSDANSTVDSYISRMRELKRGGVSMDGIGLEGHF TVPNLPLMRAILDKLGTLRLPMWLTEVDISSTLSKEAQALHLEEVLREGFSHPSLNGIMLWTALHP |
Full Sequence |
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Protein Sequence Length: 550 Download |
MKDASAFISF LVFFLLLCSP WIAASLDDPQ YDHTAYTKCK EEPEKPLYNG GILEPHQLPQ 60 FASSSPALLL HNLTASTKYS FSSWVKIESS DSDSALVTAS LRTNHETYDC IGTVAAKSGC 120 WSFLKGGFTL DLPSNSATLS FQSSDGRYIA IAIASTSLQP FTDQQWRRNQ QDMINKVRKR 180 AVMIHVSNHN GDRLQGVEIN VKQVYKDFPF GSAIAKTILG NEAYQSWFVE RFNAAVFENE 240 LKWYATEPYP GQINYTIADE MLEFIRANRI VTRGHNIFWE DPKYNPEWVQ NLSGPQLESA 300 VDTRIQSLMS RYREEFVHWD VSNEMLHFDF YEQRLGPNAT LHFFQTAHES DPLATLFMNE 360 FNVLETCSDA NSTVDSYISR MRELKRGGVS MDGIGLEGHF TVPNLPLMRA ILDKLGTLRL 420 PMWLTEVDIS STLSKEAQAL HLEEVLREGF SHPSLNGIML WTALHPNGCY QMCLTDADFR 480 NLPAGDVVDS LLGEWRTKEV NGKTNEHGSY SFEGFLGEYE VSVMHGDQTA NSTFALSQGV 540 ETRHVTILL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 7.0e-36 | 206 | 430 | 239 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 5.0e-55 | 200 | 461 | 279 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 6.0e-75 | 241 | 488 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 8 | 547 | 9 | 556 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 22 | 549 | 95 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 26 | 549 | 29 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 20 | 549 | 17 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 84 | 549 | 10 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 7e-30 | 210 | 461 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 2e-28 | 210 | 440 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 2e-28 | 210 | 440 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 2e-28 | 210 | 440 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 2e-28 | 210 | 440 | 16 | 250 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |